RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	NME8	Q8N427	588 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	KLHDC9	Q8NEP7	349 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	TRIM58	Q8NG06	486 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	NOX5	Q96PH1	765 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	DDX20	Q9UHI6	824 aa	Known RBP	13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	NOCT	Q9UK39	431 aa	Known RBP	13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	INTU	Q9ULD6	942 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	NUB1	Q9Y5A7	615 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	MRFAP1	Q9Y605	127 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	NCAN	O14594	1321 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	ANO9	A1A5B4	782 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	BTNL10	A8MVZ5	291 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435		M0QZ92	97 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	BUB1	O43683	1085 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	FKTN	O75072	461 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	CYP11B1	P15538	503 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	AXL	P30530	894 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	CRYBB1	P53674	252 aa	Predicted RBP	13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	NAP1L1	P55209	391 aa	Known RBP	13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	MYL6	P60660	151 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	MRPS6	P82932	125 aa	Known RBP	13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	HTRA3	P83110	453 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	ZNF699	Q32M78	642 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	SLC10A6	Q3KNW5	377 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	JADE1	Q6IE81	842 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	GDF6	Q6KF10	455 aa	Predicted RBP	13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	DNAAF5	Q86Y56	855 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	RNF10	Q8N5U6	811 aa	Known RBP	13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	PCSK9	Q8NBP7	692 aa	Known RBP	13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	PXYLP1	Q8TE99	480 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	TMEM40	Q8WWA1	233 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	ACAP3	Q96P50	834 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	CCDC94	Q9BW85	323 aa	Predicted RBP	13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	ASB7	Q9H672	318 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	SALL4	Q9UJQ4	1053 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	PIN4	Q9Y237	131 aa	Known RBP	13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	TRPV2	Q9Y5S1	764 aa		13.21	□□□□□ -0.29
HDLBP-231	ENST00000467435	TMCO5B	A8MYB1	307 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	CST3	P01034	146 aa	Predicted RBP	13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	ATP1A1	P05023	1023 aa	Known RBP	13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	INHA	P05111	366 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	KRT19	P08727	400 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	TMEM253	P0C7T8	217 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	CHRNB2	P17787	502 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	ACO1	P21399	889 aa	Known RBP	13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	HOXA11	P31270	313 aa	Predicted RBP	13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	FMO1	Q01740	532 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	CDR2	Q01850	454 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	TMEM132D	Q14C87	1099 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	KCNA10	Q16322	511 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	SGSM1	Q2NKQ1	1148 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	SCARA3	Q6AZY7	606 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	RSPH3	Q86UC2	560 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	SESTD1	Q86VW0	696 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	PALB2	Q86YC2	1186 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	SLAIN1	Q8ND83	568 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	MNS1	Q8NEH6	495 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	EIF2A	Q9BY44	585 aa	Known RBP	13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	CELF4	Q9BZC1	486 aa	Known RBP	13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	NIF3L1	Q9GZT8	377 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	ACP6	Q9NPH0	428 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	SAGE1	Q9NXZ1	904 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435	PCDHB4	Q9Y5E5	795 aa		13.2	□□□□□ -0.3
HDLBP-231	ENST00000467435		A0A0A6YYK5	440 aa	Predicted RBP	13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	ENC1	O14682	589 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	CTIF	O43310	598 aa	Known RBP	13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	MME	P08473	750 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	GALC	P54803	685 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	PRMT2	P55345	433 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	AMPD2	Q01433	879 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	TUBB2A	Q13885	445 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	ARHGEF6	Q15052	776 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	RNF180	Q86T96	592 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	SERINC5	Q86VE9	423 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	NT5DC4	Q86YG4	428 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	CD302	Q8IX05	232 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	UBR7	Q8N806	425 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	C1orf127	Q8N9H9	656 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	TAF4B	Q92750	862 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	SNX27	Q96L92	541 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	PCDHB18P	Q96TA0	734 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	TUBB2B	Q9BVA1	445 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	CARD6	Q9BX69	1037 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	TRIM6	Q9C030	488 aa	Predicted RBP	13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	SNTG2	Q9NY99	539 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	TAS2R14	Q9NYV8	317 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	SIX4	Q9UIU6	781 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	CDC23	Q9UJX2	597 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	C2CD2	Q9Y426	696 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	CDY2A	Q9Y6F7	541 aa		13.19	□□□□□ -0.3
HDLBP-231	ENST00000467435	ITGB3	P05106	788 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	RPLP2	P05387	115 aa	Known RBP	13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	CTSH	P09668	335 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	ABCB4	P21439	1286 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	YARS	P54577	528 aa	Known RBP	13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	BPIFB4	P59827	614 aa		13.18	□□□□□ -0.3
HDLBP-231	ENST00000467435	IFI16	Q16666	785 aa	Known RBP	13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms