RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 YME1L1Q96TA2 773 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 TUBGCP2Q9BSJ2 902 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 RC3H2Q9HBD1 1191 aaKnown RBP15.95■□□□□ 0.14
DDX56-208ENST00000467318 INTS13Q9NVM9 706 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 MIOSQ9NXC5 875 aa15.95■□□□□ 0.14
DDX56-208ENST00000467318 TBKBP1A7MCY6 615 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 CBFA2T2O43439 604 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 POMCP01189 267 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 TMEM191BP0C7N4 346 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 DLG4P78352 724 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 TFAMQ00059 246 aaKnown RBP15.94■□□□□ 0.14
DDX56-208ENST00000467318 RNASELQ05823 741 aaKnown RBP15.94■□□□□ 0.14
DDX56-208ENST00000467318 MAN2A1Q16706 1144 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 DCAF17Q5H9S7 520 aaPredicted RBP15.94■□□□□ 0.14
DDX56-208ENST00000467318 GLRA4Q5JXX5 417 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 FAM117BQ6P1L5 589 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 EFCAB13Q8IY85 973 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 CMTR2Q8IYT2 770 aaKnown RBP15.94■□□□□ 0.14
DDX56-208ENST00000467318 LRRC43Q8N309 656 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 C17orf53Q8N3J3 647 aaPredicted RBP15.94■□□□□ 0.14
DDX56-208ENST00000467318 BEST2Q8NFU1 509 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 POP1Q99575 1024 aaKnown RBP15.94■□□□□ 0.14
DDX56-208ENST00000467318 RAD9AQ99638 391 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 CXCL16Q9H2A7 254 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 KCND1Q9NSA2 647 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 TBC1D13Q9NVG8 400 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 RALGAPA2Q2PPJ7 1873 aa15.94■□□□□ 0.14
DDX56-208ENST00000467318 KIF2AO00139 706 aaPredicted RBP15.93■□□□□ 0.14
DDX56-208ENST00000467318 TNNC2P02585 160 aa15.93■□□□□ 0.14
DDX56-208ENST00000467318 NFICP08651 508 aa15.93■□□□□ 0.14
DDX56-208ENST00000467318 KCNH2Q12809 1159 aa15.93■□□□□ 0.14
DDX56-208ENST00000467318 TDHQ8IZJ6 230 aa15.93■□□□□ 0.14
DDX56-208ENST00000467318 CCDC150Q8NCX0 1101 aa15.93■□□□□ 0.14
DDX56-208ENST00000467318 FAM193BQ96PV7 902 aaPredicted RBP15.93■□□□□ 0.14
DDX56-208ENST00000467318 LIMA1Q9UHB6 759 aaKnown RBP15.93■□□□□ 0.14
DDX56-208ENST00000467318 PLAGL2Q9UPG8 496 aa15.93■□□□□ 0.14
DDX56-208ENST00000467318 TRIP11Q15643 1979 aa15.93■□□□□ 0.14
DDX56-208ENST00000467318 ANK1P16157 1881 aa15.93■□□□□ 0.14
DDX56-208ENST00000467318 PTPRSQ13332 1948 aa15.93■□□□□ 0.14
DDX56-208ENST00000467318 CARNS1A5YM72 827 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 PMM2O15305 246 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 TLL1O43897 1013 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 N4BP1O75113 896 aaKnown RBP15.92■□□□□ 0.14
DDX56-208ENST00000467318 TUBB4AP04350 444 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 ATP1A3P13637 1013 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 TUSC3Q13454 348 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 BTG3Q14201 252 aaPredicted RBP15.92■□□□□ 0.14
DDX56-208ENST00000467318 KRT31Q15323 416 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 NAB2Q15742 525 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 C1orf220Q5T0J3 134 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 KRT39Q6A163 491 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 MTMR12Q9C0I1 747 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 TMEM8AQ9HCN3 771 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 P4HA2O15460 535 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 AFPP02771 609 aaKnown RBP15.92■□□□□ 0.14
DDX56-208ENST00000467318 C4BPAP04003 597 aaKnown RBP15.92■□□□□ 0.14
DDX56-208ENST00000467318 TRIM49P0CI25 452 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 TRIM49CP0CI26 452 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 RPL9P32969 192 aaKnown RBP15.92■□□□□ 0.14
DDX56-208ENST00000467318 GATMP50440 423 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 PPP3CAQ08209 521 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 DSC1Q08554 894 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 CETN1Q12798 172 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 SYCP1Q15431 976 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 ZACNQ401N2 412 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 FNDC1Q4ZHG4 1894 aaPredicted RBP15.92■□□□□ 0.14
DDX56-208ENST00000467318 VWA3BQ502W6 1294 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 LMBRD2Q68DH5 695 aaPredicted RBP15.92■□□□□ 0.14
DDX56-208ENST00000467318 SV2AQ7L0J3 742 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 TRAPPC11Q7Z392 1133 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 OR5B17Q8NGF7 314 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 ZNF516Q92618 1163 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 DDX27Q96GQ7 796 aaKnown RBP15.92■□□□□ 0.14
DDX56-208ENST00000467318 UROC1Q96N76 676 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 NDST4Q9H3R1 872 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 DPP3Q9NY33 737 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 ITGA11Q9UKX5 1188 aa15.92■□□□□ 0.14
DDX56-208ENST00000467318 PTPRJQ12913 1337 aa15.91■□□□□ 0.14
DDX56-208ENST00000467318 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.91■□□□□ 0.14
DDX56-208ENST00000467318 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.91■□□□□ 0.14
DDX56-208ENST00000467318 LRPAP1P30533 357 aa15.91■□□□□ 0.14
DDX56-208ENST00000467318 GCLMP48507 274 aa15.91■□□□□ 0.14
DDX56-208ENST00000467318 FMO5P49326 533 aa15.91■□□□□ 0.14
DDX56-208ENST00000467318 MXI1P50539 228 aa15.91■□□□□ 0.14
DDX56-208ENST00000467318 LRMPQ12912 555 aa15.91■□□□□ 0.14
DDX56-208ENST00000467318 PAN2Q504Q3 1202 aaKnown RBP15.91■□□□□ 0.14
DDX56-208ENST00000467318 C15orf39Q6ZRI6 1047 aa15.91■□□□□ 0.14
DDX56-208ENST00000467318 C18orf25Q96B23 403 aaPredicted RBP15.91■□□□□ 0.14
DDX56-208ENST00000467318 PRO3102Q9H379 93 aa15.91■□□□□ 0.14
DDX56-208ENST00000467318 TDRD15B5MCY1 1934 aaKnown RBP15.9■□□□□ 0.14
DDX56-208ENST00000467318 DDHD2O94830 711 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 SERPINC1P01008 464 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 ALDH2P05091 517 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 SKILP12757 684 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 TNNT1P13805 278 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 COPB1P53618 953 aaKnown RBP15.9■□□□□ 0.14
DDX56-208ENST00000467318 RBM10P98175 930 aaKnown RBP15.9■□□□□ 0.14
DDX56-208ENST00000467318 BIRC3Q13489 604 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 FILIP1LQ4L180 1135 aa15.9■□□□□ 0.14
DDX56-208ENST00000467318 MIIPQ5JXC2 388 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms