RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 TMEM196Q5HYL7 178 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 SLC23A3Q6PIS1 610 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 IL27RAQ6UWB1 636 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 PRR23BQ6ZRT6 265 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 DDX42Q86XP3 938 aaKnown RBP eCLIP6.29□□□□□ -1.4
CXXC4-202ENST00000466963 NT5DC4Q86YG4 428 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 GALNT15Q8N3T1 639 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 KIFAP3Q92845 792 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 SUSD3Q96L08 255 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 CDC6Q99741 560 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 AGXT2Q9BYV1 514 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 SRRM3A6NNA2 597 aaPredicted RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 SPECC1L-ADORA2AF8WAN1 911 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 HRO43593 1189 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 GRM5P41594 1212 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 ASIC1P78348 528 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 EXOSC10Q01780 885 aaKnown RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 DRP2Q13474 957 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 VEPH1Q14D04 833 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 PLK5Q496M5 336 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 PRR16Q569H4 304 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 RAB44Q7Z6P3 723 aaPredicted RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 RASSF3Q86WH2 238 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 ETNPPLQ8TBG4 499 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 CNOT6LQ96LI5 555 aaKnown RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 EDEM2Q9BV94 578 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 CCDC94Q9BW85 323 aaPredicted RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 UNC45AQ9H3U1 944 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 TASP1Q9H6P5 420 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 KCNMB3Q9NPA1 279 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 INSL5Q9Y5Q6 135 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 ACKR2O00590 384 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 SLC9A3R1O14745 358 aaPredicted RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 SORBS3O60504 671 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 CDC45O75419 566 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 PLEKHA8P1O95397 391 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 DEXIO95424 95 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 CAVIN2O95810 425 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 C1SP09871 688 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 MCF2P10911 925 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 CTHP32929 405 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 NOVA1P51513 510 aaKnown RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 KPNA1P52294 538 aaPredicted RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 MBTD1Q05BQ5 628 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 PMS2CLQ68D20 193 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 TMEM173Q86WV6 379 aaPredicted RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 ERMNQ8TAM6 284 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 SLC7A14Q8TBB6 771 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 LEO1Q8WVC0 666 aaPredicted RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 PRPF31Q8WWY3 499 aaKnown RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 ADAMTS14Q8WXS8 1223 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 CEP170P1Q96L14 293 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 SMOC2Q9H3U7 446 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 BRMS1Q9HCU9 246 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 DNAAF2Q9NVR5 837 aaKnown RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 RBM8AQ9Y5S9 174 aaKnown RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 BRCA2P51587 3418 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 OAZ2O95190 189 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 CCDC192P0DO97 292 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 DGKEP52429 567 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 MAPK6Q16659 721 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 DUOXA1Q1HG43 343 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 FAM171A1Q5VUB5 890 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 TSHZ3Q63HK5 1081 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 CYP2U1Q7Z449 544 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 RSAD2Q8WXG1 361 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 OTUB2Q96DC9 234 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 CCDC43Q96MW1 224 aaKnown RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 TMEM209Q96SK2 561 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 ABCB6Q9NP58 842 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 TBX20Q9UMR3 447 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 TNFSF13BQ9Y275 285 aa6.28□□□□□ -1.4
CXXC4-202ENST00000466963 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.28□□□□□ -1.4
CXXC4-202ENST00000466963 CENPFP49454 3210 aa6.27□□□□□ -1.4
CXXC4-202ENST00000466963 NT5C1B-RDH14C9J2C7 533 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 PRRG1O14668 218 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 YKT6O15498 198 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 C7P10643 843 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 GDI1P31150 447 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 FNTBP49356 437 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 NECTIN1Q15223 517 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 AMHR2Q16671 573 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 METTL3Q86U44 580 aaKnown RBP6.27□□□□□ -1.41
CXXC4-202ENST00000466963 HDDC3Q8N4P3 179 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 LRRC71Q8N4P6 559 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 OLIG1Q8TAK6 271 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 BPIFB1Q8TDL5 484 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 PPP1R10Q96QC0 940 aaKnown RBP6.27□□□□□ -1.41
CXXC4-202ENST00000466963 GAD1Q99259 594 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 COMMD8Q9NX08 183 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 KCND2Q9NZV8 630 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 ZBTB24O43167 697 aaPredicted RBP6.27□□□□□ -1.41
CXXC4-202ENST00000466963 LRPAP1P30533 357 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 YWHABP31946 246 aaKnown RBP6.27□□□□□ -1.41
CXXC4-202ENST00000466963 UCNP55089 124 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 SATB1Q01826 763 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 FAM78AQ5JUQ0 283 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 EOGTQ5NDL2 527 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 VITQ6UXI7 678 aa6.27□□□□□ -1.41
CXXC4-202ENST00000466963 LPCAT2Q7L5N7 544 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms