RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 ZACNQ401N2 412 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 XKR3Q5GH77 459 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 DCAF15Q66K64 600 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 MIS18BP1Q6P0N0 1132 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 XRRA1Q6P2D8 792 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 PRUNE1Q86TP1 453 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 MSTO1Q9BUK6 570 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 C4BPAP04003 597 aaKnown RBP11.11□□□□□ -0.63
UFD1-206ENST00000466373 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 GLRA2P23416 452 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 CHKAP35790 457 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 SLC20A2Q08357 652 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 DRP2Q13474 957 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 BYSLQ13895 437 aaKnown RBP11.11□□□□□ -0.63
UFD1-206ENST00000466373 SUPT20HL1Q3ZLR7 823 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 ZFYVE27Q5T4F4 411 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 CRELD2Q6UXH1 353 aaPredicted RBP11.11□□□□□ -0.63
UFD1-206ENST00000466373 C15orf39Q6ZRI6 1047 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 MICALCLQ6ZW33 695 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 OR5B17Q8NGF7 314 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 ART4Q93070 314 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 FAM212AQ96EL1 285 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 ZNF302Q9NR11 478 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 PARP2Q9UGN5 583 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 CENPFP49454 3210 aa11.11□□□□□ -0.63
UFD1-206ENST00000466373 SPATA31C2B4DYI2 1134 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 DKC1O60832 514 aaKnown RBP eCLIP11.1□□□□□ -0.63
UFD1-206ENST00000466373 RALAP11233 206 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 CD58P19256 250 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 ZNF394Q53GI3 561 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 MMS22LQ6ZRQ5 1243 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 ANKRD35Q8N283 1001 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 ZNF668Q96K58 619 aaPredicted RBP11.1□□□□□ -0.63
UFD1-206ENST00000466373 CABS1Q96KC9 395 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 LRRC19Q9H756 370 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 ADAM22Q9P0K1 906 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 ARID2Q68CP9 1835 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 RASGRF2O14827 1237 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 TP73O15350 636 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 FDX1P10109 184 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 GNA15P30679 374 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 FNTAP49354 379 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 TAS2R40P59535 323 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 PSMD6Q15008 389 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 SPRED3Q2MJR0 410 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 ENOSF1Q7L5Y1 443 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 ZBTB33Q86T24 672 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 SLC7A3Q8WY07 619 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 SEC16BQ96JE7 1060 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 XPO6Q96QU8 1125 aaKnown RBP11.1□□□□□ -0.63
UFD1-206ENST00000466373 PLVAPQ9BX97 442 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 ADAM7Q9H2U9 754 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 CDC42EP4Q9H3Q1 356 aaKnown RBP11.1□□□□□ -0.63
UFD1-206ENST00000466373 NUB1Q9Y5A7 615 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
UFD1-206ENST00000466373 FSCN2O14926 492 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 OATP04181 439 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 RARGP13631 454 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 CUL2Q13617 745 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 CATSPERGQ6ZRH7 1159 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 MGARPQ8TDB4 240 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 CDHR1Q96JP9 859 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 TCHPQ9BT92 498 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 MTFR1LQ9H019 292 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 AAASQ9NRG9 546 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 RLFQ13129 1914 aa11.1□□□□□ -0.63
UFD1-206ENST00000466373 PARP14Q460N5 1801 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 PHIPQ8WWQ0 1821 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 PI4K2BG5E9Z4 385 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 THAP12O43422 761 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 CREB1P16220 341 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 ACO1P21399 889 aaKnown RBP11.09□□□□□ -0.63
UFD1-206ENST00000466373 ADCY8P40145 1251 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 STXBP2Q15833 593 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 ATP13A4Q4VNC1 1196 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 KAZNQ674X7 775 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 ANKS1BQ7Z6G8 1248 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 TRPM4Q8TD43 1214 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 DDX27Q96GQ7 796 aaKnown RBP11.09□□□□□ -0.63
UFD1-206ENST00000466373 PRMT1Q99873 361 aaKnown RBP11.09□□□□□ -0.63
UFD1-206ENST00000466373 MLXIPLQ9NP71 852 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 CTNNAL1Q9UBT7 734 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 RGS17Q9UGC6 210 aaPredicted RBP11.09□□□□□ -0.63
UFD1-206ENST00000466373 TCF4P15884 667 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 MARK3P27448 753 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 TNFSF9P41273 254 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 CDR1P51861 262 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 ITGA8P53708 1063 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 RTP1P59025 263 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 MCCD1P59942 119 aaPredicted RBP11.09□□□□□ -0.63
UFD1-206ENST00000466373 RPL7AP62424 266 aaKnown RBP11.09□□□□□ -0.63
UFD1-206ENST00000466373 NOP14P78316 857 aaKnown RBP11.09□□□□□ -0.63
UFD1-206ENST00000466373 CENPCQ03188 943 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 ADCY1Q08828 1119 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 SLMAPQ14BN4 828 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 LRRC14Q15048 493 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 KYNUQ16719 465 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 SPDYCQ5MJ68 293 aa11.09□□□□□ -0.63
UFD1-206ENST00000466373 ERMARDQ5T6L9 678 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms