RNA–Protein interactions for RNA: ENST00000466272.1

SMTN-214, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-214ENST00000466272 CENPPQ6IPU0 288 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.5
SMTN-214ENST00000466272 FUT10Q6P4F1 479 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 RBM43Q6ZSC3 357 aaKnown RBP11.9□□□□□ -0.5
SMTN-214ENST00000466272 SLC9A9Q8IVB4 645 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 RNF168Q8IYW5 571 aaPredicted RBP11.9□□□□□ -0.5
SMTN-214ENST00000466272 TRIML1Q8N9V2 468 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 NELFBQ8WX92 580 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 CCDC127Q96BQ5 260 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 MRPL38Q96DV4 380 aaKnown RBP11.9□□□□□ -0.5
SMTN-214ENST00000466272 POP1Q99575 1024 aaKnown RBP11.9□□□□□ -0.5
SMTN-214ENST00000466272 HERC2P3Q9BVR0 1158 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 ASB7Q9H672 318 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 ENTPD7Q9NQZ7 604 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 TLR9Q9NR96 1032 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 SLC38A7Q9NVC3 462 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
SMTN-214ENST00000466272 ADAM28Q9UKQ2 775 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 C2CD2Q9Y426 696 aa11.9□□□□□ -0.5
SMTN-214ENST00000466272 LRRIQ3A6PVS8 624 aaPredicted RBP11.89□□□□□ -0.51
SMTN-214ENST00000466272 HIDE1A8MVS5 230 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 PSMA7O14818 248 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 FSCN2O14926 492 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 ALDH2P05091 517 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 TRIM49P0CI25 452 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 TRIM49CP0CI26 452 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 CCNE1P24864 410 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 CA8P35219 290 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 GTF2F1P35269 517 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMTN-214ENST00000466272 DLG4P78352 724 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 PAK1Q13153 545 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 STIM1Q13586 685 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 PSMD6Q15008 389 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 CCDC85BQ15834 202 aaPredicted RBP11.89□□□□□ -0.51
SMTN-214ENST00000466272 NFIL3Q16649 462 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 EDRF1Q3B7T1 1238 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 SPATA1Q5VX52 437 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 TTI2Q6NXR4 508 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 DDX53Q86TM3 631 aaKnown RBP11.89□□□□□ -0.51
SMTN-214ENST00000466272 CD302Q8IX05 232 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
SMTN-214ENST00000466272 VPS52Q8N1B4 723 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 C1orf127Q8N9H9 656 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 BEST2Q8NFU1 509 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 PPM1EQ8WY54 764 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 MFSD14AQ96MC6 490 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 UROC1Q96N76 676 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 MED15Q96RN5 788 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 DUSP9Q99956 384 aaKnown RBP11.89□□□□□ -0.51
SMTN-214ENST00000466272 TCF25Q9BQ70 676 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 COLEC11Q9BWP8 271 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 DERAQ9Y315 318 aa11.89□□□□□ -0.51
SMTN-214ENST00000466272 TMEM189-UBE2V1I3L0A0 370 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 C2CD2LO14523 706 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 B3GAT3O94766 335 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 SOD2P04179 222 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 ITGB3P05106 788 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 TMEM191BP0C7N4 346 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 CYP3A5P20815 502 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 LRPAP1P30533 357 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 POLR2BP30876 1174 aaKnown RBP11.88□□□□□ -0.51
SMTN-214ENST00000466272 NLRP12P59046 1061 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
SMTN-214ENST00000466272 KRT17Q04695 432 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 UBE3AQ05086 875 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 PTPN14Q15678 1187 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 TIGD5Q53EQ6 642 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 TCEAL5Q5H9L2 206 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 RTP2Q5QGT7 225 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 C1orf220Q5T0J3 134 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 C9orf57Q5W0N0 161 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 TMC7Q7Z402 723 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 FAM186BQ8IYM0 893 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 CXorf38Q8TB03 319 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 DHTKD1Q96HY7 919 aaPredicted RBP11.88□□□□□ -0.51
SMTN-214ENST00000466272 TSG101Q99816 390 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 LMAN2LQ9H0V9 348 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 KIAA1586Q9HCI6 787 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 INTS13Q9NVM9 706 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 DPP3Q9NY33 737 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 SIX4Q9UIU6 781 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 LZTS1Q9Y250 596 aa11.88□□□□□ -0.51
SMTN-214ENST00000466272 SF3B1O75533 1304 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMTN-214ENST00000466272 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.87□□□□□ -0.51
SMTN-214ENST00000466272 ANO9A1A5B4 782 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 SPTLC1O15269 473 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 XPOTO43592 962 aaKnown RBP11.87□□□□□ -0.51
SMTN-214ENST00000466272 TADA2AO75478 443 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 CTSAP10619 480 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 TNNI1P19237 187 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 TKTP29401 623 aaKnown RBP11.87□□□□□ -0.51
SMTN-214ENST00000466272 GLUD2P49448 558 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 RBM10P98175 930 aaKnown RBP11.87□□□□□ -0.51
SMTN-214ENST00000466272 LRRC63Q05C16 580 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 ADAM9Q13443 819 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 MYBPC2Q14324 1141 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 PTPROQ16827 1216 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 FAM171A1Q5VUB5 890 aa11.87□□□□□ -0.51
SMTN-214ENST00000466272 PRSS55Q6UWB4 352 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms