RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 CNPP09543 421 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 WEE2P0C1S8 567 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 SP100P23497 879 aaPredicted RBP10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 ABCD1P33897 745 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 SYKP43405 635 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 NDUFA8P51970 172 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 ENOX2Q16206 610 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 USP41Q3LFD5 358 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 RTP2Q5QGT7 225 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 FAM26FQ5R3K3 315 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 KANK3Q6NY19 840 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 PALB2Q86YC2 1186 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 NELFCDQ8IXH7 590 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 C12orf76Q8N812 135 aaPredicted RBP10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 C3orf58Q8NDZ4 430 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 ZSWIM2Q8NEG5 633 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 CASP10Q92851 521 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 HVCN1Q96D96 273 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 DDX27Q96GQ7 796 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 EMILIN2Q9BXX0 1053 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 SCAND2PQ9GZW5 306 aaPredicted RBP10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 GOLPH3LQ9H4A5 285 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 PCIF1Q9H4Z3 704 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 MAGEF1Q9HAY2 307 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 OLFML3Q9NRN5 406 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 CNTN3Q9P232 1028 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 AGO2Q9UKV8 859 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 NUB1Q9Y5A7 615 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 DENND4AQ7Z401 1863 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 SPATA31D3P0C874 917 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 TKTP29401 623 aaKnown RBP10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 SSTR3P32745 418 aaPredicted RBP10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 MRE11P49959 708 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 SMAD4Q13485 552 aaKnown RBP10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 COL19A1Q14993 1142 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 RARS2Q5T160 578 aaKnown RBP10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 JADE1Q6IE81 842 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 SLFN12LQ6IEE8 588 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 ANKRD54Q6NXT1 300 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 ARMCX5Q6P1M9 558 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 SPATA31D4Q6ZUB0 917 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 STXBP4Q6ZWJ1 553 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 UNC13DQ70J99 1090 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 RNF168Q8IYW5 571 aaPredicted RBP10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 FEZF2Q8TBJ5 459 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 MSLNLQ96KJ4 702 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 C7orf25Q9BPX7 421 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 PYM1Q9BRP8 204 aaKnown RBP10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 ST6GALNAC4Q9H4F1 302 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 SLC39A2Q9NP94 309 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 SLC38A7Q9NVC3 462 aa10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 USP15Q9Y4E8 981 aaPredicted RBP10.59□□□□□ -0.71
RTFDC1-205ENST00000466260 A0A0B4J269 797 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 TTC26A0AVF1 554 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 FSD2A1L4K1 749 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 GOLGA6L4A6NEF3 574 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 CLIC2O15247 247 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 TEX28O15482 410 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 FAM189A1O60320 539 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 NFICP08651 508 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 KCNE1P15382 129 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 SCP2P22307 547 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 CMA1P23946 247 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 CLCN4P51793 760 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 DSG1Q02413 1049 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 ALCAMQ13740 583 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 PSMD5Q16401 504 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 UPP1Q16831 310 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 XKR4Q5GH76 650 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 DCLRE1AQ6PJP8 1040 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 ALKAL1Q6UXT8 129 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 SMRP1Q8NCR6 262 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 PAGE5Q96GU1 130 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 UROC1Q96N76 676 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 CBWD1Q9BRT8 395 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 FAM213AQ9BRX8 229 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 TTPALQ9BTX7 342 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 STRA6Q9BX79 667 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 TMEM206Q9H813 350 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 MAN1C1Q9NR34 630 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 EXOC1Q9NV70 894 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 STK39Q9UEW8 545 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 CPSF3Q9UKF6 684 aaKnown RBP10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 UBQLN1Q9UMX0 589 aaKnown RBP10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 FAM50BQ9Y247 325 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 HPSEQ9Y251 543 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 SSX2IPQ9Y2D8 614 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 IRAK3Q9Y616 596 aa10.58□□□□□ -0.72
RTFDC1-205ENST00000466260 VCANP13611 3396 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 DOCK6Q96HP0 2047 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 PPEF2O14830 753 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 LILRB3O75022 631 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 GLUD1P00367 558 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 ADH1AP07327 375 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 SLFN14P0C7P3 912 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 ADSSP30520 456 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 CYP2J2P51589 502 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 ARPP19P56211 112 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 ELAVL2Q12926 359 aaKnown RBP10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 KCNC3Q14003 757 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms