RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PHACTR2O75167 634 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 CST3P01034 146 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-205ENST00000466192 SLC10A3P09131 477 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 ACO1P21399 889 aaKnown RBP19.59■□□□□ 0.73
COL9A3-205ENST00000466192 TMOD1P28289 359 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 OSTNP61366 133 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 CUL2Q13617 745 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 FAM187BQ17R55 369 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 C8orf74Q6P047 294 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 USP6NLQ92738 828 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 MTMR12Q9C0I1 747 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 UMODL1Q5DID0 1318 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 CLTAP09496 248 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 ZNF865P0CJ78 1059 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-205ENST00000466192 CYP2C19P33261 490 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 AP3M2P53677 418 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 NOP14P78316 857 aaKnown RBP19.59■□□□□ 0.73
COL9A3-205ENST00000466192 MAP9Q49MG5 647 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 CCNI2Q6ZMN8 369 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-205ENST00000466192 LENG1Q96BZ8 264 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-205ENST00000466192 GDAP1L1Q96MZ0 367 aa19.59■□□□□ 0.73
COL9A3-205ENST00000466192 TRIP12Q14669 1992 aaPredicted RBP19.58■□□□□ 0.73
COL9A3-205ENST00000466192 A6NJR5 290 aa19.58■□□□□ 0.72
COL9A3-205ENST00000466192 CES2O00748 559 aa19.58■□□□□ 0.72
COL9A3-205ENST00000466192 CEP104O60308 925 aa19.58■□□□□ 0.72
COL9A3-205ENST00000466192 OLFML2BQ68BL8 750 aa19.58■□□□□ 0.72
COL9A3-205ENST00000466192 TMEM192Q8IY95 271 aa19.58■□□□□ 0.72
COL9A3-205ENST00000466192 USP38Q8NB14 1042 aa19.58■□□□□ 0.72
COL9A3-205ENST00000466192 PBKQ96KB5 322 aa19.58■□□□□ 0.72
COL9A3-205ENST00000466192 UBXN6Q9BZV1 441 aa19.58■□□□□ 0.72
COL9A3-205ENST00000466192 A0A0U1RQG5 324 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-205ENST00000466192 GPR25O00155 361 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 GPC5P78333 572 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 IRX5P78411 483 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-205ENST00000466192 SURF1Q15526 300 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 EFCAB13Q8IY85 973 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 KIAA0319LQ8IZA0 1049 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 SETD4Q9NVD3 440 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 STIM2Q9P246 746 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 AMFRQ9UKV5 643 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 CYP2B6P20813 491 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 TNNT3P45378 269 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-205ENST00000466192 DUOXA2Q1HG44 320 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 HES6Q96HZ4 224 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 SELENOOQ9BVL4 669 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 CHORDC1Q9UHD1 332 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-205ENST00000466192 CITO14578 2027 aa19.57■□□□□ 0.72
COL9A3-205ENST00000466192 PASKQ96RG2 1323 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 FAM155AB1AL88 458 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-205ENST00000466192 ASS1P00966 412 aaKnown RBP19.56■□□□□ 0.72
COL9A3-205ENST00000466192 OAS2P29728 719 aaKnown RBP19.56■□□□□ 0.72
COL9A3-205ENST00000466192 HADHBP55084 474 aaKnown RBP19.56■□□□□ 0.72
COL9A3-205ENST00000466192 GABPB1Q06547 395 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-205ENST00000466192 IRF5Q13568 498 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 TCEAL1Q15170 157 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 RHOT2Q8IXI1 618 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 PPP1R13LQ8WUF5 828 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 NLRP7Q8WX94 980 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 CPB2Q96IY4 423 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 KRT12Q99456 494 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 PLEKHA4Q9H4M7 779 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 PDZD7Q9H5P4 517 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 CTTNBP2NLQ9P2B4 639 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 GJD2Q9UKL4 321 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 PCDHB2Q9Y5E7 798 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 TRIP11Q15643 1979 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 ZEB2O60315 1214 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 CLSTN1O94985 981 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 CXCL8P10145 99 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 ARF4P18085 180 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-205ENST00000466192 TBXAS1P24557 533 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-205ENST00000466192 INHBEP58166 350 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 MYL6P60660 151 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 TFAMQ00059 246 aaKnown RBP19.56■□□□□ 0.72
COL9A3-205ENST00000466192 TLK2Q86UE8 772 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 KAT2BQ92831 832 aa19.56■□□□□ 0.72
COL9A3-205ENST00000466192 POLR3GO15318 223 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-205ENST00000466192 ATMINO43313 823 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-205ENST00000466192 B4GALT4O60513 344 aa19.55■□□□□ 0.72
COL9A3-205ENST00000466192 F2P00734 622 aa19.55■□□□□ 0.72
COL9A3-205ENST00000466192 CLEC16AQ2KHT3 1053 aa19.55■□□□□ 0.72
COL9A3-205ENST00000466192 TMEM270Q6UE05 265 aa19.55■□□□□ 0.72
COL9A3-205ENST00000466192 ACTRT1Q8TDG2 376 aa19.55■□□□□ 0.72
COL9A3-205ENST00000466192 IMPG2Q9BZV3 1241 aa19.55■□□□□ 0.72
COL9A3-205ENST00000466192 CNTN6Q9UQ52 1028 aa19.55■□□□□ 0.72
COL9A3-205ENST00000466192 PCDHB4Q9Y5E5 795 aa19.55■□□□□ 0.72
COL9A3-205ENST00000466192 MEFVO15553 781 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-205ENST00000466192 CRHR2Q13324 411 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 GLE1Q53GS7 698 aaKnown RBP19.54■□□□□ 0.72
COL9A3-205ENST00000466192 ACAD10Q6JQN1 1059 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 RPF1Q9H9Y2 349 aaKnown RBP19.54■□□□□ 0.72
COL9A3-205ENST00000466192 ZFYVE28Q9HCC9 887 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 NOC2LQ9Y3T9 749 aaKnown RBP19.54■□□□□ 0.72
COL9A3-205ENST00000466192 PGRMC1O00264 195 aaKnown RBP19.54■□□□□ 0.72
COL9A3-205ENST00000466192 TMEM191BP0C7N4 346 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 MCF2P10911 925 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 RGS2P41220 211 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 BPIFB4P59827 614 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 ZNF677Q86XU0 584 aa19.54■□□□□ 0.72
COL9A3-205ENST00000466192 KLHL7Q8IXQ5 586 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms