RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 PCIF1Q9H4Z3 704 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 UBQLN1Q9UMX0 589 aaKnown RBP28.17■■■□□ 2.1
SMC4-206ENST00000465903 SSX2IPQ9Y2D8 614 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 HCFC2Q9Y5Z7 792 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 UBE4BO95155 1302 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 SCN1AP35498 2009 aa28.16■■■□□ 2.1
SMC4-206ENST00000465903 RPN1P04843 607 aaKnown RBP28.16■■■□□ 2.1
SMC4-206ENST00000465903 CYP3A5P20815 502 aa28.16■■■□□ 2.1
SMC4-206ENST00000465903 PSMD2Q13200 908 aa28.16■■■□□ 2.1
SMC4-206ENST00000465903 RTP2Q5QGT7 225 aa28.16■■■□□ 2.1
SMC4-206ENST00000465903 FAM171A1Q5VUB5 890 aa28.16■■■□□ 2.1
SMC4-206ENST00000465903 JADE1Q6IE81 842 aa28.16■■■□□ 2.1
SMC4-206ENST00000465903 LLGL2Q6P1M3 1020 aa28.16■■■□□ 2.1
SMC4-206ENST00000465903 GPR65Q8IYL9 337 aa28.16■■■□□ 2.1
SMC4-206ENST00000465903 FAM213AQ9BRX8 229 aa28.16■■■□□ 2.1
SMC4-206ENST00000465903 ASB7Q9H672 318 aa28.16■■■□□ 2.1
SMC4-206ENST00000465903 GOLGA8IPA6NC78 632 aa28.15■■■□□ 2.1
SMC4-206ENST00000465903 GOLGA8JA6NMD2 632 aa28.15■■■□□ 2.1
SMC4-206ENST00000465903 LDHAP00338 332 aaKnown RBP28.15■■■□□ 2.1
SMC4-206ENST00000465903 LRPAP1P30533 357 aa28.15■■■□□ 2.1
SMC4-206ENST00000465903 BRCC3P46736 316 aa28.15■■■□□ 2.1
SMC4-206ENST00000465903 WNT7BP56706 349 aa28.15■■■□□ 2.1
SMC4-206ENST00000465903 ELAVL2Q12926 359 aaKnown RBP28.15■■■□□ 2.1
SMC4-206ENST00000465903 CLUL1Q15846 466 aa28.15■■■□□ 2.1
SMC4-206ENST00000465903 ARMCX5Q6P1M9 558 aa28.15■■■□□ 2.1
SMC4-206ENST00000465903 NELFCDQ8IXH7 590 aa28.15■■■□□ 2.1
SMC4-206ENST00000465903 EMILIN2Q9BXX0 1053 aa28.15■■■□□ 2.1
SMC4-206ENST00000465903 EXOC1Q9NV70 894 aa28.15■■■□□ 2.1
SMC4-206ENST00000465903 GRXCR2A6NFK2 248 aa28.14■■■□□ 2.1
SMC4-206ENST00000465903 TEX28O15482 410 aa28.14■■■□□ 2.1
SMC4-206ENST00000465903 GADD45BO75293 160 aaPredicted RBP28.14■■■□□ 2.1
SMC4-206ENST00000465903 NFICP08651 508 aa28.14■■■□□ 2.1
SMC4-206ENST00000465903 GUCY2FP51841 1108 aa28.14■■■□□ 2.1
SMC4-206ENST00000465903 SPATA1Q5VX52 437 aa28.14■■■□□ 2.1
SMC4-206ENST00000465903 PTCRAQ6ISU1 281 aaPredicted RBP28.14■■■□□ 2.1
SMC4-206ENST00000465903 KIAA1841Q6NSI8 718 aa28.14■■■□□ 2.1
SMC4-206ENST00000465903 RIN2Q8WYP3 895 aaPredicted RBP28.14■■■□□ 2.1
SMC4-206ENST00000465903 CD207Q9UJ71 328 aa28.14■■■□□ 2.1
SMC4-206ENST00000465903 I3L4J1 428 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 EXTL3O43909 919 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 IL9P15248 144 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 EPCAMP16422 314 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 FGFR3P22607 806 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 FAM160A1Q05DH4 1040 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 ANKRD54Q6NXT1 300 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 SYCE2Q6PIF2 218 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 PRSS55Q6UWB4 352 aaPredicted RBP28.13■■■□□ 2.09
SMC4-206ENST00000465903 BRSK2Q8IWQ3 736 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 LNX1Q8TBB1 728 aaPredicted RBP28.13■■■□□ 2.09
SMC4-206ENST00000465903 CASP10Q92851 521 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 TTPALQ9BTX7 342 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 DERAQ9Y315 318 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 NCOR1O75376 2440 aa28.13■■■□□ 2.09
SMC4-206ENST00000465903 KIAA0391O15091 583 aaKnown RBP28.12■■■□□ 2.09
SMC4-206ENST00000465903 MBTPS2O43462 519 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 RHOBTB3O94955 611 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 KLRC2P26717 231 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 CLCN4P51793 760 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 KNOP1Q1ED39 458 aaKnown RBP28.12■■■□□ 2.09
SMC4-206ENST00000465903 KANK3Q6NY19 840 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 CEP57Q86XR8 500 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 EFCAB13Q8IY85 973 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 GPD1LQ8N335 351 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 TMEM87AQ8NBN3 555 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 PIK3R5Q8WYR1 880 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 COL25A1Q9BXS0 654 aaPredicted RBP28.12■■■□□ 2.09
SMC4-206ENST00000465903 AGPAT3Q9NRZ7 376 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 FNIP2Q9P278 1114 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 VCANP13611 3396 aa28.12■■■□□ 2.09
SMC4-206ENST00000465903 CLIC2O15247 247 aa28.11■■■□□ 2.09
SMC4-206ENST00000465903 XPOTO43592 962 aaKnown RBP28.11■■■□□ 2.09
SMC4-206ENST00000465903 SNRPFP62306 86 aaKnown RBP28.11■■■□□ 2.09
SMC4-206ENST00000465903 TMEM132DQ14C87 1099 aa28.11■■■□□ 2.09
SMC4-206ENST00000465903 PUS10Q3MIT2 529 aaKnown RBP28.11■■■□□ 2.09
SMC4-206ENST00000465903 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.11■■■□□ 2.09
SMC4-206ENST00000465903 PPFIBP1Q86W92 1011 aa28.11■■■□□ 2.09
SMC4-206ENST00000465903 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.11■■■□□ 2.09
SMC4-206ENST00000465903 HSPBP1Q9NZL4 362 aa28.11■■■□□ 2.09
SMC4-206ENST00000465903 C2CD2Q9Y426 696 aa28.11■■■□□ 2.09
SMC4-206ENST00000465903 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.11■■■□□ 2.09
SMC4-206ENST00000465903 IL18RAPO95256 599 aa28.1■■■□□ 2.09
SMC4-206ENST00000465903 RPL17P18621 184 aaKnown RBP28.1■■■□□ 2.09
SMC4-206ENST00000465903 TKTP29401 623 aaKnown RBP28.1■■■□□ 2.09
SMC4-206ENST00000465903 KCNB1Q14721 858 aa28.1■■■□□ 2.09
SMC4-206ENST00000465903 SMRP1Q8NCR6 262 aa28.1■■■□□ 2.09
SMC4-206ENST00000465903 BEST2Q8NFU1 509 aa28.1■■■□□ 2.09
SMC4-206ENST00000465903 FBXL18Q96ME1 805 aa28.1■■■□□ 2.09
SMC4-206ENST00000465903 TIGD1Q96MW7 591 aa28.1■■■□□ 2.09
SMC4-206ENST00000465903 S1PR5Q9H228 398 aa28.1■■■□□ 2.09
SMC4-206ENST00000465903 TTC28Q96AY4 2481 aa28.1■■■□□ 2.09
SMC4-206ENST00000465903 PPEF2O14830 753 aa28.09■■■□□ 2.09
SMC4-206ENST00000465903 TRAPPC3O43617 180 aa28.09■■■□□ 2.09
SMC4-206ENST00000465903 ADH1AP07327 375 aa28.09■■■□□ 2.09
SMC4-206ENST00000465903 SRGAP2BP0DMP2 458 aa28.09■■■□□ 2.09
SMC4-206ENST00000465903 SMAD4Q13485 552 aaKnown RBP28.09■■■□□ 2.09
SMC4-206ENST00000465903 PNOCQ13519 176 aa28.09■■■□□ 2.09
SMC4-206ENST00000465903 ADAMTS19Q8TE59 1207 aa28.09■■■□□ 2.09
SMC4-206ENST00000465903 CLSTN3Q9BQT9 956 aa28.09■■■□□ 2.09
SMC4-206ENST00000465903 RBAKQ9NYW8 714 aaPredicted RBP28.09■■■□□ 2.09
SMC4-206ENST00000465903 NUB1Q9Y5A7 615 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms