RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CBWD1Q9BRT8 395 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 EXOC1Q9NV70 894 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 UBQLN1Q9UMX0 589 aaKnown RBP14.03□□□□□ -0.16
COL5A1-206ENST00000465877 FAM50BQ9Y247 325 aa14.03□□□□□ -0.16
COL5A1-206ENST00000465877 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.03□□□□□ -0.16
COL5A1-206ENST00000465877 I3L4J1 428 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 TEX28O15482 410 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 XPOTO43592 962 aaKnown RBP14.02□□□□□ -0.17
COL5A1-206ENST00000465877 ADH1AP07327 375 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 ADRB2P07550 413 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 NFICP08651 508 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 PRR29P0C7W0 189 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 EPCAMP16422 314 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 HOXD13P35453 343 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 CLCN4P51793 760 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 CREMQ03060 361 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 TMEM132DQ14C87 1099 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 POSTNQ15063 836 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 BMT2Q1RMZ1 405 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 JADE1Q6IE81 842 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 ANKRD54Q6NXT1 300 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 ARMCX5Q6P1M9 558 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 DCLRE1AQ6PJP8 1040 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 PRSS55Q6UWB4 352 aaPredicted RBP14.02□□□□□ -0.17
COL5A1-206ENST00000465877 CD300LGQ6UXG3 332 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 CRELD2Q6UXH1 353 aaPredicted RBP14.02□□□□□ -0.17
COL5A1-206ENST00000465877 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.02□□□□□ -0.17
COL5A1-206ENST00000465877 KRBA2Q6ZNG9 492 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 PPFIBP1Q86W92 1011 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 BRSK2Q8IWQ3 736 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 GPR65Q8IYL9 337 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 TMEM130Q8N3G9 435 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 ZSWIM2Q8NEG5 633 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 SCFD1Q8WVM8 642 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 PIK3R5Q8WYR1 880 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 FAM212AQ96EL1 285 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 SAAL1Q96ER3 474 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 DDX27Q96GQ7 796 aaKnown RBP14.02□□□□□ -0.17
COL5A1-206ENST00000465877 NECAB3Q96P71 396 aaPredicted RBP14.02□□□□□ -0.17
COL5A1-206ENST00000465877 TTPALQ9BTX7 342 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 RXFP1Q9HBX9 757 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.02□□□□□ -0.17
COL5A1-206ENST00000465877 DZANK1Q9NVP4 752 aa14.02□□□□□ -0.17
COL5A1-206ENST00000465877 GOLGA6L4A6NEF3 574 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 CYP3A5P20815 502 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 LRPAP1P30533 357 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 RPL9P32969 192 aaKnown RBP14.01□□□□□ -0.17
COL5A1-206ENST00000465877 BRCC3P46736 316 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 SMAD2Q15796 467 aaKnown RBP14.01□□□□□ -0.17
COL5A1-206ENST00000465877 ZBTB6Q15916 424 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 PSMD5Q16401 504 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 CEP57Q86XR8 500 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 CD302Q8IX05 232 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 NELFCDQ8IXH7 590 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 EFCAB13Q8IY85 973 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 KIAA0895Q8NCT3 520 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 ZNF507Q8TCN5 953 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 SLC22A17Q8WUG5 538 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 TSPAN18Q96SJ8 248 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 FAM213AQ9BRX8 229 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 ASB7Q9H672 318 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 SLC39A2Q9NP94 309 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 C2CD2Q9Y426 696 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 NUB1Q9Y5A7 615 aa14.01□□□□□ -0.17
COL5A1-206ENST00000465877 KIAA0391O15091 583 aaKnown RBP14□□□□□ -0.17
COL5A1-206ENST00000465877 TRAPPC3O43617 180 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 EXTL3O43909 919 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 ZNF202O95125 648 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 IL18RAPO95256 599 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 LDHAP00338 332 aaKnown RBP14□□□□□ -0.17
COL5A1-206ENST00000465877 GLUD1P00367 558 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 HOXB8P17481 243 aaPredicted RBP14□□□□□ -0.17
COL5A1-206ENST00000465877 RPL17P18621 184 aaKnown RBP14□□□□□ -0.17
COL5A1-206ENST00000465877 FGFR3P22607 806 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 KLRC2P26717 231 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 TKTP29401 623 aaKnown RBP14□□□□□ -0.17
COL5A1-206ENST00000465877 MCM4P33991 863 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 GUCY2FP51841 1108 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 POU5F1Q01860 360 aaKnown RBP14□□□□□ -0.17
COL5A1-206ENST00000465877 KMT5BQ4FZB7 885 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 SPATA1Q5VX52 437 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 PDXDC1Q6P996 788 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 SYCE2Q6PIF2 218 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 GLYCTKQ8IVS8 523 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 GPD1LQ8N335 351 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 BEST2Q8NFU1 509 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 NOC3LQ8WTT2 800 aaKnown RBP14□□□□□ -0.17
COL5A1-206ENST00000465877 APOL5Q9BWW9 433 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 PCIF1Q9H4Z3 704 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 MAN1C1Q9NR34 630 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 RBAKQ9NYW8 714 aaPredicted RBP14□□□□□ -0.17
COL5A1-206ENST00000465877 FNIP2Q9P278 1114 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 DERAQ9Y315 318 aa14□□□□□ -0.17
COL5A1-206ENST00000465877 USP15Q9Y4E8 981 aaPredicted RBP14□□□□□ -0.17
COL5A1-206ENST00000465877 GOLGA8IPA6NC78 632 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 GOLGA8JA6NMD2 632 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 DLL1O00548 723 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 SYN3O14994 580 aa13.99□□□□□ -0.17
COL5A1-206ENST00000465877 TGFB1I1O43294 461 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms