RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 MPLP40238 635 aa7.37□□□□□ -1.23
SSB-207ENST00000465871 FOXR2Q6PJQ5 311 aa7.37□□□□□ -1.23
SSB-207ENST00000465871 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.37□□□□□ -1.23
SSB-207ENST00000465871 Q96MF0 132 aa7.37□□□□□ -1.23
SSB-207ENST00000465871 C7orf25Q9BPX7 421 aa7.37□□□□□ -1.23
SSB-207ENST00000465871 TBCCD1Q9NVR7 557 aa7.37□□□□□ -1.23
SSB-207ENST00000465871 MYBBP1AQ9BQG0 1328 aaKnown RBP7.36□□□□□ -1.23
SSB-207ENST00000465871 CKBP12277 381 aa7.36□□□□□ -1.23
SSB-207ENST00000465871 DACT2Q5SW24 774 aa7.36□□□□□ -1.23
SSB-207ENST00000465871 VOPP1Q96AW1 172 aa7.36□□□□□ -1.23
SSB-207ENST00000465871 INSL6Q9Y581 213 aa7.36□□□□□ -1.23
SSB-207ENST00000465871 CDHR4A6H8M9 788 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 PLA2G5P39877 138 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 WASP42768 502 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 CYP2A13Q16696 494 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 ATP2B3Q16720 1220 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 CCDC142Q17RM4 750 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 NECAB2Q7Z6G3 386 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 FITM2Q8N6M3 262 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 CNTD1Q8N815 330 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 SIMC1Q8NDZ2 872 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 NTN5Q8WTR8 489 aaPredicted RBP7.35□□□□□ -1.23
SSB-207ENST00000465871 NUP133Q8WUM0 1156 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 NRG4Q8WWG1 115 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 NACC2Q96BF6 587 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 PUS7LQ9H0K6 701 aaKnown RBP7.35□□□□□ -1.23
SSB-207ENST00000465871 R3HDMLQ9H3Y0 253 aa7.35□□□□□ -1.23
SSB-207ENST00000465871 MTO1Q9Y2Z2 717 aaKnown RBP7.35□□□□□ -1.23
SSB-207ENST00000465871 CREMQ03060 361 aa7.34□□□□□ -1.23
SSB-207ENST00000465871 Q6ZNX1 250 aa7.34□□□□□ -1.23
SSB-207ENST00000465871 RD3Q7Z3Z2 195 aa7.34□□□□□ -1.23
SSB-207ENST00000465871 RHOT1Q8IXI2 618 aa7.34□□□□□ -1.23
SSB-207ENST00000465871 DPF2Q92785 391 aa7.34□□□□□ -1.23
SSB-207ENST00000465871 PNKPQ96T60 521 aa7.34□□□□□ -1.23
SSB-207ENST00000465871 C11orf54Q9H0W9 315 aaPredicted RBP7.34□□□□□ -1.23
SSB-207ENST00000465871 GSTO2Q9H4Y5 243 aa7.34□□□□□ -1.23
SSB-207ENST00000465871 SLC5A4Q9NY91 659 aa7.34□□□□□ -1.23
SSB-207ENST00000465871 SAP30BPQ9UHR5 308 aaKnown RBP7.34□□□□□ -1.23
SSB-207ENST00000465871 INTUQ9ULD6 942 aa7.34□□□□□ -1.23
SSB-207ENST00000465871 COX11Q9Y6N1 276 aa7.34□□□□□ -1.23
SSB-207ENST00000465871 TCRBV7S2A1N4TA0A589 114 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 KIAA0391O15091 583 aaKnown RBP7.33□□□□□ -1.24
SSB-207ENST00000465871 ERN1O75460 977 aaKnown RBP7.33□□□□□ -1.24
SSB-207ENST00000465871 VAV2P52735 878 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 CTXN1P60606 82 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 NOMO3P69849 1222 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 CLUL1Q15846 466 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 INAVAQ3KP66 663 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 NOMO2Q5JPE7 1267 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 SYCE2Q6PIF2 218 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 DDX42Q86XP3 938 aaKnown RBP eCLIP7.33□□□□□ -1.24
SSB-207ENST00000465871 PPM1NQ8N819 430 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 MARS2Q96GW9 593 aaKnown RBP7.33□□□□□ -1.24
SSB-207ENST00000465871 MED15Q96RN5 788 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 ALG13Q9NP73 1137 aaKnown RBP7.33□□□□□ -1.24
SSB-207ENST00000465871 CASS4Q9NQ75 786 aa7.33□□□□□ -1.24
SSB-207ENST00000465871 MYADML2A6NDP7 307 aa7.32□□□□□ -1.24
SSB-207ENST00000465871 HAUS5O94927 633 aa7.32□□□□□ -1.24
SSB-207ENST00000465871 MRPS21P82921 87 aaKnown RBP7.32□□□□□ -1.24
SSB-207ENST00000465871 SLFN5Q08AF3 891 aa7.32□□□□□ -1.24
SSB-207ENST00000465871 MIGA2Q7L4E1 593 aa7.32□□□□□ -1.24
SSB-207ENST00000465871 COLGALT2Q8IYK4 626 aa7.32□□□□□ -1.24
SSB-207ENST00000465871 CBARPQ8N350 705 aaPredicted RBP7.32□□□□□ -1.24
SSB-207ENST00000465871 NLGN4YQ8NFZ3 816 aaPredicted RBP7.32□□□□□ -1.24
SSB-207ENST00000465871 CAGE1Q8TC20 777 aa7.32□□□□□ -1.24
SSB-207ENST00000465871 UNKLQ9H9P5 680 aaKnown RBP7.32□□□□□ -1.24
SSB-207ENST00000465871 HSFX1Q9UBD0 423 aa7.32□□□□□ -1.24
SSB-207ENST00000465871 TLK1Q9UKI8 766 aa7.32□□□□□ -1.24
SSB-207ENST00000465871 SPATA31A6Q5VVP1 1343 aa7.31□□□□□ -1.24
SSB-207ENST00000465871 MASP2O00187 686 aa7.31□□□□□ -1.24
SSB-207ENST00000465871 NDUFS2O75306 463 aa7.31□□□□□ -1.24
SSB-207ENST00000465871 CD38P28907 300 aa7.31□□□□□ -1.24
SSB-207ENST00000465871 IARSP41252 1262 aaKnown RBP7.31□□□□□ -1.24
SSB-207ENST00000465871 ZNF169Q14929 603 aaPredicted RBP7.31□□□□□ -1.24
SSB-207ENST00000465871 FBXO42Q6P3S6 717 aa7.31□□□□□ -1.24
SSB-207ENST00000465871 DCBLD1Q8N8Z6 715 aa7.31□□□□□ -1.24
SSB-207ENST00000465871 C1orf162Q8NEQ5 155 aaPredicted RBP7.31□□□□□ -1.24
SSB-207ENST00000465871 TBC1D15Q8TC07 691 aa7.31□□□□□ -1.24
SSB-207ENST00000465871 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
SSB-207ENST00000465871 TDP1Q9NUW8 608 aa7.31□□□□□ -1.24
SSB-207ENST00000465871 TUBD1Q9UJT1 453 aa7.31□□□□□ -1.24
SSB-207ENST00000465871 SALL3Q9BXA9 1300 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 ZFPL1O95159 310 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 FCER1AP12319 257 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 SLC16A1P53985 500 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 C21orf58P58505 322 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 CDC42EP1Q00587 391 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 TARDBPQ13148 414 aaKnown RBP eCLIP7.3□□□□□ -1.24
SSB-207ENST00000465871 GEN1Q17RS7 908 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 PGM2L1Q6PCE3 622 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 JADE3Q92613 823 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 NELL1Q92832 810 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 PTCD3Q96EY7 689 aaKnown RBP7.3□□□□□ -1.24
SSB-207ENST00000465871 TMX3Q96JJ7 454 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 AIFM2Q9BRQ8 373 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 DUSP26Q9BV47 211 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 SPC25Q9HBM1 224 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 MKS1Q9NXB0 559 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 KCTD5Q9NXV2 234 aa7.3□□□□□ -1.24
SSB-207ENST00000465871 DMTF1Q9Y222 760 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms