RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 TPCN1Q9ULQ1 816 aa12.98□□□□□ -0.33
CNOT4-208ENST00000465721 GDAQ9Y2T3 454 aa12.98□□□□□ -0.33
CNOT4-208ENST00000465721 ZNF638Q14966 1978 aaKnown RBP12.98□□□□□ -0.33
CNOT4-208ENST00000465721 I3L4J1 428 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 ACKR2O00590 384 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 NCAM2O15394 837 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 TBC1D4O60343 1298 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 FDPSP14324 419 aaKnown RBP12.97□□□□□ -0.33
CNOT4-208ENST00000465721 TXKP42681 527 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 NAMPTP43490 491 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 CLCNKBP51801 687 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 ROR1Q01973 937 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 MAPK6Q16659 721 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 UPP1Q16831 310 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 SLC8B1Q6J4K2 584 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 ANKS3Q6ZW76 656 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 CATSPER3Q86XQ3 398 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 TCEAL4Q96EI5 215 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 ADPGKQ9BRR6 497 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 RTKNQ9BST9 563 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 TMEM60Q9H2L4 133 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 TUFT1Q9NNX1 390 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 USP18Q9UMW8 372 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 MRPS17Q9Y2R5 130 aaKnown RBP12.97□□□□□ -0.33
CNOT4-208ENST00000465721 OBSL1O75147 1896 aa12.97□□□□□ -0.33
CNOT4-208ENST00000465721 NCANO14594 1321 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 WDR27A2RRH5 827 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 MED24O75448 989 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 ATP2B1P20020 1258 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 CCR2P41597 374 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 BRCC3P46736 316 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 SOX4Q06945 474 aaPredicted RBP12.96□□□□□ -0.33
CNOT4-208ENST00000465721 GRM2Q14416 872 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 WASF1Q92558 559 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 UROC1Q96N76 676 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 IER2Q9BTL4 223 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 KIFC3Q9BVG8 833 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 GMEB2Q9UKD1 530 aa12.96□□□□□ -0.33
CNOT4-208ENST00000465721 ZZEF1O43149 2961 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 DCDC2BA2VCK2 349 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 ABLIM3O94929 683 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 SEC24AO95486 1093 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 LRG1P02750 347 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 ADRB1P08588 477 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 LIG1P18858 919 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 FAM78AQ5JUQ0 283 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 NT5DC1Q5TFE4 455 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 MAMSTRQ6ZN01 415 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 ZNF461Q8TAF7 563 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 DEPTORQ8TB45 409 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 ASB16Q96NS5 453 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 CORO1BQ9BR76 489 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 BRD9Q9H8M2 597 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 NDRG2Q9UN36 371 aaKnown RBP12.95□□□□□ -0.34
CNOT4-208ENST00000465721 INSL5Q9Y5Q6 135 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 MYO16Q9Y6X6 1858 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 KIAA1549LQ6ZVL6 1849 aa12.95□□□□□ -0.34
CNOT4-208ENST00000465721 TCHHQ07283 1943 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 BTBD18B2RXH4 712 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 MAN2B1O00754 1011 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 MOSPD3O75425 235 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 PTPN2P17706 415 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 CYP11B2P19099 503 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 LPAL2Q16609 132 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 XKR4Q5GH76 650 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 ATF7IP2Q5U623 682 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 LAIR1Q6GTX8 287 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 VITQ6UXI7 678 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 MAP4K3Q8IVH8 894 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
CNOT4-208ENST00000465721 TCEAL8Q8IYN2 117 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 CEP120Q8N960 986 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 NACC1Q96RE7 527 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 POLR3CQ9BUI4 534 aaPredicted RBP12.94□□□□□ -0.34
CNOT4-208ENST00000465721 ZFP14Q9HCL3 533 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 TRPV5Q9NQA5 729 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.94□□□□□ -0.34
CNOT4-208ENST00000465721 IGF2RP11717 2491 aa12.94□□□□□ -0.34
CNOT4-208ENST00000465721 ZFYVE26Q68DK2 2539 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 SMIM28A0A1B0GU29 152 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 ARHGEF35A5YM69 484 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 ARNTLO00327 626 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 PRRG1O14668 218 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 TRAPPC3O43617 180 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 MICAL2O94851 1124 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 LARGE1O95461 756 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 ATF2P15336 505 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 NRLP54845 237 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 SPEM2Q0P670 501 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 MRPL58Q14197 206 aaKnown RBP12.93□□□□□ -0.34
CNOT4-208ENST00000465721 PPP2R5AQ15172 486 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 ALKAL1Q6UXT8 129 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 PDZD4Q76G19 769 aaPredicted RBP12.93□□□□□ -0.34
CNOT4-208ENST00000465721 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 IRF7Q92985 503 aa12.93□□□□□ -0.34
CNOT4-208ENST00000465721 ZMAT2Q96NC0 199 aaKnown RBP12.93□□□□□ -0.34
CNOT4-208ENST00000465721 TRMT61BQ9BVS5 477 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms