RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SMOC2Q9H3U7 446 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 ST6GALNAC4Q9H4F1 302 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 USTQ9Y2C2 406 aa23.75■■□□□ 1.39
LIME1-203ENST00000465591 MUC6Q6W4X9 2439 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 LACTBL1A8MY62 500 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 OGTO15294 1046 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 N4BP1O75113 896 aaKnown RBP23.74■■□□□ 1.39
LIME1-203ENST00000465591 PPP1R37O75864 691 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 F13A1P00488 732 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 HSP90AA1P07900 732 aaKnown RBP23.74■■□□□ 1.39
LIME1-203ENST00000465591 SCP2P22307 547 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 OR1D2P34982 312 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 ZBTB6Q15916 424 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 ZNF720Q7Z2F6 126 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 ZDHHC14Q8IZN3 488 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 SMG7Q92540 1137 aaKnown RBP23.74■■□□□ 1.39
LIME1-203ENST00000465591 STRA6Q9BX79 667 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 RHOBTB2Q9BYZ6 727 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 TBC1D7Q9P0N9 293 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 LIMD1Q9UGP4 676 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 DPP7Q9UHL4 492 aa23.74■■□□□ 1.39
LIME1-203ENST00000465591 PPP6R2O75170 966 aa23.73■■□□□ 1.39
LIME1-203ENST00000465591 ZMYND10O75800 440 aa23.73■■□□□ 1.39
LIME1-203ENST00000465591 RPL9P32969 192 aaKnown RBP23.73■■□□□ 1.39
LIME1-203ENST00000465591 GUCY2FP51841 1108 aa23.73■■□□□ 1.39
LIME1-203ENST00000465591 KCNA1Q09470 495 aa23.73■■□□□ 1.39
LIME1-203ENST00000465591 MSTO1Q9BUK6 570 aa23.73■■□□□ 1.39
LIME1-203ENST00000465591 FGFBP2Q9BYJ0 223 aa23.73■■□□□ 1.39
LIME1-203ENST00000465591 PLEKHA5Q9HAU0 1116 aa23.73■■□□□ 1.39
LIME1-203ENST00000465591 WDR6Q9NNW5 1121 aaKnown RBP23.73■■□□□ 1.39
LIME1-203ENST00000465591 ZDHHC7Q9NXF8 308 aa23.73■■□□□ 1.39
LIME1-203ENST00000465591 CDY1Q9Y6F8 540 aa23.73■■□□□ 1.39
LIME1-203ENST00000465591 NOTCH4Q99466 2003 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 TMEM221A6NGB7 291 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 M0R296 226 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 TRAPPC3O43617 180 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 YEATS4O95619 227 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 ADRB2P07550 413 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 CASP5P51878 434 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 RAB33AQ14088 237 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 E2F4Q16254 413 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 PDXDC1Q6P996 788 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 ELMSAN1Q6PJG2 1045 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 SHC4Q6S5L8 630 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 STAMQ92783 540 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 KIF12Q96FN5 646 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 PRKD2Q9BZL6 878 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 CPSF3Q9UKF6 684 aaKnown RBP23.72■■□□□ 1.39
LIME1-203ENST00000465591 BACE2Q9Y5Z0 518 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 CLUHO75153 1309 aa23.72■■□□□ 1.39
LIME1-203ENST00000465591 PPP2R3AQ06190 1150 aa23.71■■□□□ 1.39
LIME1-203ENST00000465591 VARS2Q5ST30 1063 aaKnown RBP23.71■■□□□ 1.39
LIME1-203ENST00000465591 AXDND1Q5T1B0 1012 aaPredicted RBP23.71■■□□□ 1.39
LIME1-203ENST00000465591 CYP26C1Q6V0L0 522 aa23.71■■□□□ 1.39
LIME1-203ENST00000465591 ASIC4Q96FT7 647 aa23.71■■□□□ 1.39
LIME1-203ENST00000465591 RPF1Q9H9Y2 349 aaKnown RBP23.71■■□□□ 1.39
LIME1-203ENST00000465591 NUB1Q9Y5A7 615 aa23.71■■□□□ 1.39
LIME1-203ENST00000465591 STYXL1Q9Y6J8 313 aa23.71■■□□□ 1.39
LIME1-203ENST00000465591 FRMD3A2A2Y4 597 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 TBC1D4O60343 1298 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 C8AP07357 584 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 IDEP14735 1019 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 GAP43P17677 238 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 LRPAP1P30533 357 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 ACOT2P49753 483 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 SIGLEC14Q08ET2 396 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 ANKS3Q6ZW76 656 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 OTOP3Q7RTS5 596 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 SUSD3Q96L08 255 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 MYADMQ96S97 322 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 MRPL44Q9H9J2 332 aaKnown RBP23.7■■□□□ 1.38
LIME1-203ENST00000465591 PIDD1Q9HB75 910 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 SEL1LQ9UBV2 794 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 SORCS3Q9UPU3 1222 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 SCN1AP35498 2009 aa23.7■■□□□ 1.38
LIME1-203ENST00000465591 PPEF2O14830 753 aa23.69■■□□□ 1.38
LIME1-203ENST00000465591 CUTAO60888 179 aa23.69■■□□□ 1.38
LIME1-203ENST00000465591 ADSSP30520 456 aa23.69■■□□□ 1.38
LIME1-203ENST00000465591 ABCD1P33897 745 aa23.69■■□□□ 1.38
LIME1-203ENST00000465591 MCM4P33991 863 aa23.69■■□□□ 1.38
LIME1-203ENST00000465591 MRPL58Q14197 206 aaKnown RBP23.69■■□□□ 1.38
LIME1-203ENST00000465591 KYAT1Q16773 422 aa23.69■■□□□ 1.38
LIME1-203ENST00000465591 PLCD3Q8N3E9 789 aa23.69■■□□□ 1.38
LIME1-203ENST00000465591 HVCN1Q96D96 273 aa23.69■■□□□ 1.38
LIME1-203ENST00000465591 FAM212AQ96EL1 285 aa23.69■■□□□ 1.38
LIME1-203ENST00000465591 UBQLN1Q9UMX0 589 aaKnown RBP23.69■■□□□ 1.38
LIME1-203ENST00000465591 HCN4Q9Y3Q4 1203 aa23.69■■□□□ 1.38
LIME1-203ENST00000465591 SYN3O14994 580 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 NFICP08651 508 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 NTHL1P78549 312 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 ROR1Q01973 937 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 LIN9Q5TKA1 542 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 ADALQ6DHV7 355 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 JADE1Q6IE81 842 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 SLC8B1Q6J4K2 584 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 BMP8AQ7Z5Y6 402 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 ZSWIM2Q8NEG5 633 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 SLC7A14Q8TBB6 771 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 ACSF2Q96CM8 615 aaPredicted RBP23.68■■□□□ 1.38
LIME1-203ENST00000465591 OLFML3Q9NRN5 406 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms