RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 MAPK6Q16659 721 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 EARS2Q5JPH6 523 aaKnown RBP13.26□□□□□ -0.29
TRA2B-208ENST00000465245 PRSS36Q5K4E3 855 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 VITQ6UXI7 678 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 PDZD4Q76G19 769 aaPredicted RBP13.26□□□□□ -0.29
TRA2B-208ENST00000465245 MCPH1Q8NEM0 835 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 ZNF461Q8TAF7 563 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 ASB16Q96NS5 453 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 PPP1R10Q96QC0 940 aaKnown RBP13.26□□□□□ -0.29
TRA2B-208ENST00000465245 C2orf40Q9H1Z8 148 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 TTC12Q9H892 705 aaPredicted RBP13.26□□□□□ -0.29
TRA2B-208ENST00000465245 GOLGA2P5Q9HBQ8 144 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 ZNF334Q9HCZ1 680 aaPredicted RBP13.26□□□□□ -0.29
TRA2B-208ENST00000465245 USP20Q9Y2K6 914 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 CEP295Q9C0D2 2601 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 A0A087WWV3 80 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 WDR27A2RRH5 827 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 NRG2O14511 850 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-208ENST00000465245 GDF9O60383 454 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 PSMC3P17980 439 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 BRCC3P46736 316 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 CXCL12P48061 93 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 DCAF4L1Q3SXM0 396 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 EEF1DP3Q658K8 133 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 MAP4K3Q8IVH8 894 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 DDX1Q92499 740 aaKnown RBP13.25□□□□□ -0.29
TRA2B-208ENST00000465245 UROC1Q96N76 676 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 CYP4F11Q9HBI6 524 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 TRPV5Q9NQA5 729 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 INSL5Q9Y5Q6 135 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 CYP46A1Q9Y6A2 500 aa13.25□□□□□ -0.29
TRA2B-208ENST00000465245 KIF26AQ9ULI4 1882 aaPredicted RBP13.25□□□□□ -0.29
TRA2B-208ENST00000465245 STK36Q9NRP7 1315 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 CHURC1-FNTBB4DL54 471 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 ACKR2O00590 384 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 FOXD2O60548 495 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-208ENST00000465245 MICAL2O94851 1124 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 ABLIM3O94929 683 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 EDN1P05305 212 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 CHRNB1P11230 501 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 ATF2P15336 505 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 ATP2B1P20020 1258 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 CCNE1P24864 410 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 CCR2P41597 374 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 FNTBP49356 437 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 ARPP19P56211 112 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 DMWDQ09019 674 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 SRSF5Q13243 272 aaKnown RBP13.24□□□□□ -0.29
TRA2B-208ENST00000465245 NR5A1Q13285 461 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 UPP1Q16831 310 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 SLC8B1Q6J4K2 584 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 CD300LGQ6UXG3 332 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 ELMOD1Q8N336 334 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 C3orf58Q8NDZ4 430 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 DEPTORQ8TB45 409 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 DEPDC1BQ8WUY9 529 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 SMARCD2Q92925 531 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 CCDC113Q9H0I3 377 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 ANGPTL2Q9UKU9 493 aa13.24□□□□□ -0.29
TRA2B-208ENST00000465245 FAM208BQ5VWN6 2430 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 NUP210Q8TEM1 1887 aaPredicted RBP13.23□□□□□ -0.29
TRA2B-208ENST00000465245 SDK1Q7Z5N4 2213 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 ZNF263O14978 683 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 HRO43593 1189 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 REC8O95072 547 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 SEC24AO95486 1093 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 XRCC6P12956 609 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRA2B-208ENST00000465245 CNR2P34972 360 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 KRT2P35908 639 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 VIPR2P41587 438 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 TXKP42681 527 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 NAMPTP43490 491 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 SCRN1Q12765 414 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 PTGDRQ13258 359 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 LRRC32Q14392 662 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 GAS6Q14393 721 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 CYP4A22Q5TCH4 519 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 IL31Q6EBC2 164 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 IQCEQ6IPM2 695 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 TCEAL8Q8IYN2 117 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 SPEM1Q8N4L4 309 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 BSNDQ8WZ55 320 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 BRMS1Q9HCU9 246 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 ASPMQ8IZT6 3477 aa13.23□□□□□ -0.29
TRA2B-208ENST00000465245 NCANO14594 1321 aa13.22□□□□□ -0.29
TRA2B-208ENST00000465245 ZZEF1O43149 2961 aa13.22□□□□□ -0.29
TRA2B-208ENST00000465245 H7C4K7 107 aa13.22□□□□□ -0.29
TRA2B-208ENST00000465245 NEMFO60524 1076 aa13.22□□□□□ -0.29
TRA2B-208ENST00000465245 DTNBO60941 627 aa13.22□□□□□ -0.29
TRA2B-208ENST00000465245 MYL4P12829 197 aa13.22□□□□□ -0.29
TRA2B-208ENST00000465245 AASDHQ4L235 1098 aaPredicted RBP13.22□□□□□ -0.29
TRA2B-208ENST00000465245 HEATR6Q6AI08 1181 aaKnown RBP13.22□□□□□ -0.29
TRA2B-208ENST00000465245 CEP68Q76N32 757 aa13.22□□□□□ -0.29
TRA2B-208ENST00000465245 CENPQQ7L2Z9 268 aaPredicted RBP13.22□□□□□ -0.29
TRA2B-208ENST00000465245 LONP2Q86WA8 852 aa13.22□□□□□ -0.29
TRA2B-208ENST00000465245 MFSD6LQ8IWD5 586 aa13.22□□□□□ -0.29
TRA2B-208ENST00000465245 HS6ST3Q8IZP7 471 aa13.22□□□□□ -0.29
TRA2B-208ENST00000465245 ZSCAN18Q8TBC5 510 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms