RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 CHST7Q9NS84 486 aa14.86□□□□□ -0.03
LIMD1-203ENST00000465039 MYO7AQ13402 2215 aa14.86□□□□□ -0.03
LIMD1-203ENST00000465039 PODXLO00592 558 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 SYN3O14994 580 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 EXOC3O60645 756 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 TADA2AO75478 443 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 URODP06132 367 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 PNPLA4P41247 253 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 GLUD2P49448 558 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 AARSP49588 968 aaKnown RBP eCLIP14.85□□□□□ -0.03
LIMD1-203ENST00000465039 CLCNKBP51801 687 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 MCCD1P59942 119 aaPredicted RBP14.85□□□□□ -0.03
LIMD1-203ENST00000465039 CLDN10P78369 228 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 DSG1Q02413 1049 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 SOX4Q06945 474 aaPredicted RBP14.85□□□□□ -0.03
LIMD1-203ENST00000465039 PSMD6Q15008 389 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 JADE1Q6IE81 842 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 TMC7Q7Z402 723 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 MFSD14AQ96MC6 490 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 TSG101Q99816 390 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 VN1R3Q9BXE9 311 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 OXCT2Q9BYC2 517 aaPredicted RBP14.85□□□□□ -0.03
LIMD1-203ENST00000465039 NUP62CLQ9H1M0 184 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 CXCL16Q9H2A7 254 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 MRPL17Q9NRX2 175 aaKnown RBP14.85□□□□□ -0.03
LIMD1-203ENST00000465039 MAN1B1Q9UKM7 699 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 ITGA11Q9UKX5 1188 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 COG5Q9UP83 839 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 FRMD4BQ9Y2L6 1034 aa14.85□□□□□ -0.03
LIMD1-203ENST00000465039 ANO9A1A5B4 782 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 NT5C1B-RDH14C9J2C7 533 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 NFICP08651 508 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 SRGAP2BP0DMP2 458 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 PRCPP42785 496 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 CYP2J2P51589 502 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 ERVFC1P60507 584 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 CYP24A1Q07973 514 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 PTPN14Q15678 1187 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 PPFIBP1Q86W92 1011 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 CBWD2Q8IUF1 395 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 ZC3H3Q8IXZ2 948 aaKnown RBP14.84□□□□□ -0.03
LIMD1-203ENST00000465039 LRRC52Q8N7C0 313 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 PIK3R5Q8WYR1 880 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 PAAF1Q9BRP4 392 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 EMILIN2Q9BXX0 1053 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 TUBGCP4Q9UGJ1 667 aa14.84□□□□□ -0.03
LIMD1-203ENST00000465039 COL6A3P12111 3177 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 BICDL2A1A5D9 508 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 C2orf71A6NGG8 1288 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 PIRO00625 290 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 LILRB3O75022 631 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 FGFR3P22607 806 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 NR2F2P24468 414 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 DUSP6Q16828 381 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 DUOXA2Q1HG44 320 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 CT47A1Q5JQC4 288 aaPredicted RBP14.83□□□□□ -0.04
LIMD1-203ENST00000465039 KIAA0319Q5VV43 1072 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 KIAA1841Q6NSI8 718 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 RBM43Q6ZSC3 357 aaKnown RBP14.83□□□□□ -0.04
LIMD1-203ENST00000465039 INTS8Q75QN2 995 aaKnown RBP14.83□□□□□ -0.04
LIMD1-203ENST00000465039 EFCAB13Q8IY85 973 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 EFHBQ8N7U6 833 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 TMC2Q8TDI7 906 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 MICAL1Q8TDZ2 1067 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 C18orf25Q96B23 403 aaPredicted RBP14.83□□□□□ -0.04
LIMD1-203ENST00000465039 PABPC5Q96DU9 382 aaKnown RBP14.83□□□□□ -0.04
LIMD1-203ENST00000465039 SUSD3Q96L08 255 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 ZNF560Q96MR9 790 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 FNBP1Q96RU3 617 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 TTPALQ9BTX7 342 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 PCIF1Q9H4Z3 704 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 RXFP1Q9HBX9 757 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 INTS13Q9NVM9 706 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 FNIP2Q9P278 1114 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 DPP7Q9UHL4 492 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 NUB1Q9Y5A7 615 aa14.83□□□□□ -0.04
LIMD1-203ENST00000465039 GOLGA8IPA6NC78 632 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 GOLGA8JA6NMD2 632 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 M0QZQ0 153 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 IKBKBO14920 756 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 CLIC2O15247 247 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 SLC16A3O15427 465 aaKnown RBP14.82□□□□□ -0.04
LIMD1-203ENST00000465039 CCNE1P24864 410 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 IRS1P35568 1242 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 FKBP3Q00688 224 aaKnown RBP14.82□□□□□ -0.04
LIMD1-203ENST00000465039 CTC1Q2NKJ3 1217 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 TCEAL5Q5H9L2 206 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 C9orf57Q5W0N0 161 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 ELMSAN1Q6PJG2 1045 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 CD300LGQ6UXG3 332 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 TMEM184AQ6ZMB5 413 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 ANKS3Q6ZW76 656 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 MLKLQ8NB16 471 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 C3orf58Q8NDZ4 430 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 APPL2Q8NEU8 664 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 SPATA18Q8TC71 538 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 ANKRD36BP1Q96IX9 119 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 CGRRF1Q99675 332 aa14.82□□□□□ -0.04
LIMD1-203ENST00000465039 GPR62Q9BZJ7 368 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms