RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CREB5Q02930 508 aa10.53□□□□□ -0.72
APP-213ENST00000464867 TROAPQ12815 778 aa10.53□□□□□ -0.72
APP-213ENST00000464867 GAS6Q14393 721 aa10.53□□□□□ -0.72
APP-213ENST00000464867 ELF2Q15723 593 aa10.53□□□□□ -0.72
APP-213ENST00000464867 UVSSAQ2YD98 709 aa10.53□□□□□ -0.72
APP-213ENST00000464867 ZNF746Q6NUN9 644 aaPredicted RBP10.53□□□□□ -0.72
APP-213ENST00000464867 FUT10Q6P4F1 479 aa10.53□□□□□ -0.72
APP-213ENST00000464867 MRPL10Q7Z7H8 261 aaKnown RBP10.53□□□□□ -0.72
APP-213ENST00000464867 CNNM3Q8NE01 707 aa10.53□□□□□ -0.72
APP-213ENST00000464867 SLC7A14Q8TBB6 771 aa10.53□□□□□ -0.72
APP-213ENST00000464867 CSGALNACT1Q8TDX6 532 aa10.53□□□□□ -0.72
APP-213ENST00000464867 FDXACB1Q9BRP7 624 aaPredicted RBP10.53□□□□□ -0.72
APP-213ENST00000464867 ZNF334Q9HCZ1 680 aaPredicted RBP10.53□□□□□ -0.72
APP-213ENST00000464867 IGSF5Q9NSI5 407 aa10.53□□□□□ -0.72
APP-213ENST00000464867 TBC1D22BQ9NU19 505 aa10.53□□□□□ -0.72
APP-213ENST00000464867 PDCD11Q14690 1871 aaKnown RBP10.53□□□□□ -0.72
APP-213ENST00000464867 WDR81Q562E7 1941 aa10.52□□□□□ -0.72
APP-213ENST00000464867 ACACAQ13085 2346 aa10.52□□□□□ -0.72
APP-213ENST00000464867 CCDC163A0A0D9SF12 145 aa10.52□□□□□ -0.73
APP-213ENST00000464867 H0Y626 953 aa10.52□□□□□ -0.73
APP-213ENST00000464867 ZNF263O14978 683 aa10.52□□□□□ -0.73
APP-213ENST00000464867 RHOBTB1O94844 696 aa10.52□□□□□ -0.73
APP-213ENST00000464867 TRIM16O95361 564 aa10.52□□□□□ -0.73
APP-213ENST00000464867 CAVIN2O95810 425 aa10.52□□□□□ -0.73
APP-213ENST00000464867 EFEMP2O95967 443 aa10.52□□□□□ -0.73
APP-213ENST00000464867 FOSP01100 380 aaPredicted RBP10.52□□□□□ -0.73
APP-213ENST00000464867 POU2F2P09086 479 aa10.52□□□□□ -0.73
APP-213ENST00000464867 ITGA4P13612 1032 aa10.52□□□□□ -0.73
APP-213ENST00000464867 PSMC3P17980 439 aa10.52□□□□□ -0.73
APP-213ENST00000464867 GNAQP50148 359 aa10.52□□□□□ -0.73
APP-213ENST00000464867 AFF1P51825 1210 aaKnown RBP10.52□□□□□ -0.73
APP-213ENST00000464867 MLLT6P55198 1093 aaPredicted RBP10.52□□□□□ -0.73
APP-213ENST00000464867 AXDND1Q5T1B0 1012 aaPredicted RBP10.52□□□□□ -0.73
APP-213ENST00000464867 TCEAL6Q6IPX3 200 aa10.52□□□□□ -0.73
APP-213ENST00000464867 RTL10Q7L3V2 364 aa10.52□□□□□ -0.73
APP-213ENST00000464867 NIPA1Q7RTP0 329 aa10.52□□□□□ -0.73
APP-213ENST00000464867 ZNF410Q86VK4 478 aa10.52□□□□□ -0.73
APP-213ENST00000464867 TCEAL3Q969E4 200 aa10.52□□□□□ -0.73
APP-213ENST00000464867 ZC3H10Q96K80 434 aaKnown RBP10.52□□□□□ -0.73
APP-213ENST00000464867 HCFC1R1Q9NWW0 138 aa10.52□□□□□ -0.73
APP-213ENST00000464867 DNMT3BQ9UBC3 853 aaKnown RBP10.52□□□□□ -0.73
APP-213ENST00000464867 KLK13Q9UKR3 277 aa10.52□□□□□ -0.73
APP-213ENST00000464867 MYO18BQ8IUG5 2567 aa10.52□□□□□ -0.73
APP-213ENST00000464867 NOTCH4Q99466 2003 aa10.51□□□□□ -0.73
APP-213ENST00000464867 PCNX2A6NKB5 2137 aa10.51□□□□□ -0.73
APP-213ENST00000464867 IPO5O00410 1097 aaKnown RBP10.51□□□□□ -0.73
APP-213ENST00000464867 KHNYNO15037 678 aaKnown RBP10.51□□□□□ -0.73
APP-213ENST00000464867 KPNA1P52294 538 aaPredicted RBP10.51□□□□□ -0.73
APP-213ENST00000464867 UAP1L1Q3KQV9 507 aa10.51□□□□□ -0.73
APP-213ENST00000464867 PDXDC1Q6P996 788 aa10.51□□□□□ -0.73
APP-213ENST00000464867 PRSS55Q6UWB4 352 aaPredicted RBP10.51□□□□□ -0.73
APP-213ENST00000464867 CYB5R4Q7L1T6 521 aa10.51□□□□□ -0.73
APP-213ENST00000464867 PLA2G4DQ86XP0 818 aa10.51□□□□□ -0.73
APP-213ENST00000464867 RHPN2Q8IUC4 686 aa10.51□□□□□ -0.73
APP-213ENST00000464867 MAP4K3Q8IVH8 894 aa10.51□□□□□ -0.73
APP-213ENST00000464867 YAF2Q8IY57 180 aa10.51□□□□□ -0.73
APP-213ENST00000464867 SYNPOQ8N3V7 929 aa10.51□□□□□ -0.73
APP-213ENST00000464867 DEFB124Q8NES8 71 aa10.51□□□□□ -0.73
APP-213ENST00000464867 DEPDC1BQ8WUY9 529 aa10.51□□□□□ -0.73
APP-213ENST00000464867 RILPL2Q969X0 211 aa10.51□□□□□ -0.73
APP-213ENST00000464867 LRIG1Q96JA1 1093 aa10.51□□□□□ -0.73
APP-213ENST00000464867 BBC3Q96PG8 261 aaPredicted RBP10.51□□□□□ -0.73
APP-213ENST00000464867 ZNF577Q9BSK1 485 aa10.51□□□□□ -0.73
APP-213ENST00000464867 GPR62Q9BZJ7 368 aa10.51□□□□□ -0.73
APP-213ENST00000464867 C8orf33Q9H7E9 229 aaPredicted RBP10.51□□□□□ -0.73
APP-213ENST00000464867 RBM12Q9NTZ6 932 aaKnown RBP10.51□□□□□ -0.73
APP-213ENST00000464867 AGPAT5Q9NUQ2 364 aa10.51□□□□□ -0.73
APP-213ENST00000464867 ADAM28Q9UKQ2 775 aa10.51□□□□□ -0.73
APP-213ENST00000464867 ASXL3Q9C0F0 2248 aa10.51□□□□□ -0.73
APP-213ENST00000464867 SF3B1O75533 1304 aaKnown RBP eCLIP10.51□□□□□ -0.73
APP-213ENST00000464867 FREM2Q5SZK8 3169 aa10.51□□□□□ -0.73
APP-213ENST00000464867 LNP1A1A4G5 178 aa10.5□□□□□ -0.73
APP-213ENST00000464867 ARL5CA6NH57 179 aa10.5□□□□□ -0.73
APP-213ENST00000464867 ZNF197O14709 1029 aa10.5□□□□□ -0.73
APP-213ENST00000464867 RHOP08100 348 aa10.5□□□□□ -0.73
APP-213ENST00000464867 PTPN2P17706 415 aa10.5□□□□□ -0.73
APP-213ENST00000464867 DSC1Q08554 894 aa10.5□□□□□ -0.73
APP-213ENST00000464867 Q6ZS52 159 aa10.5□□□□□ -0.73
APP-213ENST00000464867 CEP57Q86XR8 500 aa10.5□□□□□ -0.73
APP-213ENST00000464867 TEX2Q8IWB9 1127 aa10.5□□□□□ -0.73
APP-213ENST00000464867 HNRNPLLQ8WVV9 542 aaKnown RBP10.5□□□□□ -0.73
APP-213ENST00000464867 NLRP4Q96MN2 994 aa10.5□□□□□ -0.73
APP-213ENST00000464867 MAP3K14Q99558 947 aa10.5□□□□□ -0.73
APP-213ENST00000464867 TTPALQ9BTX7 342 aa10.5□□□□□ -0.73
APP-213ENST00000464867 DSCC1Q9BVC3 393 aa10.5□□□□□ -0.73
APP-213ENST00000464867 CYLDQ9NQC7 956 aa10.5□□□□□ -0.73
APP-213ENST00000464867 CACNA2D2Q9NY47 1150 aa10.5□□□□□ -0.73
APP-213ENST00000464867 SUCLA2Q9P2R7 463 aaPredicted RBP10.5□□□□□ -0.73
APP-213ENST00000464867 SLC8A2Q9UPR5 921 aa10.5□□□□□ -0.73
APP-213ENST00000464867 PCDHB9Q9Y5E1 797 aa10.5□□□□□ -0.73
APP-213ENST00000464867 ASCC3Q8N3C0 2202 aaKnown RBP10.49□□□□□ -0.73
APP-213ENST00000464867 SHROOM3Q8TF72 1996 aa10.49□□□□□ -0.73
APP-213ENST00000464867 F8W810 466 aa10.49□□□□□ -0.73
APP-213ENST00000464867 DHX15O43143 795 aaKnown RBP10.49□□□□□ -0.73
APP-213ENST00000464867 ATG13O75143 517 aa10.49□□□□□ -0.73
APP-213ENST00000464867 MLH1P40692 756 aa10.49□□□□□ -0.73
APP-213ENST00000464867 PXNP49023 591 aaPredicted RBP10.49□□□□□ -0.73
APP-213ENST00000464867 PRKCEQ02156 737 aa10.49□□□□□ -0.73
APP-213ENST00000464867 NCBP1Q09161 790 aaKnown RBP10.49□□□□□ -0.73
APP-213ENST00000464867 PSMD5Q16401 504 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms