RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 GTF2F1P35269 517 aaKnown RBP eCLIP13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 POU5F1Q01860 360 aaKnown RBP13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 PTPN14Q15678 1187 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 USP41Q3LFD5 358 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 FAM171A1Q5VUB5 890 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 CLEC17AQ6ZS10 378 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 TAS1R1Q7RTX1 841 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 CEP57Q86XR8 500 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 ELOA2Q8IYF1 753 aaPredicted RBP13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 MRPL43Q8N983 215 aaKnown RBP13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 XXYLT1Q8NBI6 393 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 RDH13Q8NBN7 331 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 B3GALT6Q96L58 329 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 CDCA3Q99618 268 aaPredicted RBP13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 EMILIN2Q9BXX0 1053 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 GPR62Q9BZJ7 368 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 COG5Q9UP83 839 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 C2CD2Q9Y426 696 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 PCDHA5Q9Y5H7 936 aa13.05□□□□□ -0.32
RPUSD3-211ENST00000464783 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 TMEM189-UBE2V1I3L0A0 370 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 PDXKO00764 312 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 EXOC3O60645 756 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 ADRB2P07550 413 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 MCM4P33991 863 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 NDUFV1P49821 464 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 GUCY2FP51841 1108 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 TFAMQ00059 246 aaKnown RBP13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 SURF1Q15526 300 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 SNRNP35Q16560 246 aaKnown RBP13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 DUSP6Q16828 381 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 ZNF658Q5TYW1 1059 aaPredicted RBP13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 SPATA1Q5VX52 437 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 LLGL2Q6P1M3 1020 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 NT5DC4Q86YG4 428 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 CBWD2Q8IUF1 395 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 SMYD4Q8IYR2 804 aaPredicted RBP13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 GUF1Q8N442 669 aaKnown RBP13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 CACTINQ8WUQ7 758 aaKnown RBP13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 PABPC5Q96DU9 382 aaKnown RBP13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 TTPALQ9BTX7 342 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 GTPBP4Q9BZE4 634 aaKnown RBP13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 UBE2ZQ9H832 354 aaPredicted RBP13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 PRUNE2Q8WUY3 3088 aa13.04□□□□□ -0.32
RPUSD3-211ENST00000464783 I3L4J1 428 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 LINC01565O15544 149 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 NR3C1P04150 777 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 TMEM191BP0C7N4 346 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 KCNA5P22460 613 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 KLRC2P26717 231 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 LRPAP1P30533 357 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 BRCC3P46736 316 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 DSG1Q02413 1049 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 CREMQ03060 361 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 STIM1Q13586 685 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 ZBTB6Q15916 424 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 CAMK4Q16566 473 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 ISM2Q6H9L7 571 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 C12orf56Q8IXR9 622 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 EFCAB13Q8IY85 973 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 RNF168Q8IYW5 571 aaPredicted RBP13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 EFHBQ8N7U6 833 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 C3orf58Q8NDZ4 430 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 RIN2Q8WYP3 895 aaPredicted RBP13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 FNBP1Q96RU3 617 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 KCTD10Q9H3F6 313 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 DPP3Q9NY33 737 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 R3HCC1Q9Y3T6 440 aaKnown RBP13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 IRAK3Q9Y616 596 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 SCN1AP35498 2009 aa13.03□□□□□ -0.32
RPUSD3-211ENST00000464783 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 BIN1O00499 593 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 CLASP2O75122 1294 aaKnown RBP13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 EFEMP2O95967 443 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 ADH1AP07327 375 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 AAK1Q2M2I8 961 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 RTP2Q5QGT7 225 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 KIAA0319Q5VV43 1072 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 CEP135Q66GS9 1140 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 PDXDC1Q6P996 788 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 DSTYKQ6XUX3 929 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 GLYCTKQ8IVS8 523 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 TMEM130Q8N3G9 435 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 SPATA20Q8TB22 786 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 CCDC127Q96BQ5 260 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 ANKRD36BP1Q96IX9 119 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 KLHL5Q96PQ7 755 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 TSG101Q99816 390 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 CHST7Q9NS84 486 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 LMBRD1Q9NUN5 540 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 MAN1B1Q9UKM7 699 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 FRMD4BQ9Y2L6 1034 aa13.02□□□□□ -0.33
RPUSD3-211ENST00000464783 MTCL1Q9Y4B5 1905 aaKnown RBP13.01□□□□□ -0.33
RPUSD3-211ENST00000464783 H3BQ06 376 aaPredicted RBP13.01□□□□□ -0.33
RPUSD3-211ENST00000464783 TNNC2P02585 160 aa13.01□□□□□ -0.33
RPUSD3-211ENST00000464783 ITGB3P05106 788 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms