RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 EMILIN2Q9BXX0 1053 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 PCIF1Q9H4Z3 704 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 CHST7Q9NS84 486 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 HCFC2Q9Y5Z7 792 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 CITO14578 2027 aa18.52■□□□□ 0.55
VPS52-215ENST00000464425 GOLGA8IPA6NC78 632 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 GOLGA8JA6NMD2 632 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 I3L4J1 428 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 EIF3DO15371 548 aaKnown RBP eCLIP18.51■□□□□ 0.55
VPS52-215ENST00000464425 KLRC2P26717 231 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 RPL9P32969 192 aaKnown RBP18.51■□□□□ 0.55
VPS52-215ENST00000464425 GUCY2FP51841 1108 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 DPYDQ12882 1025 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 KCNC3Q14003 757 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 CRELD2Q6UXH1 353 aaPredicted RBP18.51■□□□□ 0.55
VPS52-215ENST00000464425 SCFD1Q8WVM8 642 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 COL25A1Q9BXS0 654 aaPredicted RBP18.51■□□□□ 0.55
VPS52-215ENST00000464425 EXOC1Q9NV70 894 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 CD207Q9UJ71 328 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 SSX2IPQ9Y2D8 614 aa18.51■□□□□ 0.55
VPS52-215ENST00000464425 TCF20Q9UGU0 1960 aaKnown RBP18.5■□□□□ 0.55
VPS52-215ENST00000464425 FSD2A1L4K1 749 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 GRXCR2A6NFK2 248 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 TMEM189-UBE2V1I3L0A0 370 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 TEX28O15482 410 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 RPN1P04843 607 aaKnown RBP18.5■□□□□ 0.55
VPS52-215ENST00000464425 ADRB2P07550 413 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 EPCAMP16422 314 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 PTMSP20962 102 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 GARTP22102 1010 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 BRCC3P46736 316 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 STK4Q13043 487 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 ZBTB6Q15916 424 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 RTP2Q5QGT7 225 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 JADE1Q6IE81 842 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 ARMCX5Q6P1M9 558 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 PRSS55Q6UWB4 352 aaPredicted RBP18.5■□□□□ 0.55
VPS52-215ENST00000464425 TMEM184AQ6ZMB5 413 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 ADAMTS19Q8TE59 1207 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 MSLNLQ96KJ4 702 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 NECAB3Q96P71 396 aaPredicted RBP18.5■□□□□ 0.55
VPS52-215ENST00000464425 TTPALQ9BTX7 342 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 APOL5Q9BWW9 433 aa18.5■□□□□ 0.55
VPS52-215ENST00000464425 UBQLN1Q9UMX0 589 aaKnown RBP18.5■□□□□ 0.55
VPS52-215ENST00000464425 MBD3O95983 291 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 NFICP08651 508 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 SRGAP2BP0DMP2 458 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 IL9P15248 144 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 RPL17P18621 184 aaKnown RBP18.49■□□□□ 0.55
VPS52-215ENST00000464425 ELAVL2Q12926 359 aaKnown RBP18.49■□□□□ 0.55
VPS52-215ENST00000464425 PSMD2Q13200 908 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 PUS10Q3MIT2 529 aaKnown RBP18.49■□□□□ 0.55
VPS52-215ENST00000464425 ANKRD54Q6NXT1 300 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 GLYCTKQ8IVS8 523 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 CD302Q8IX05 232 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 SPATA20Q8TB22 786 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 GPT2Q8TD30 523 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 SLC22A17Q8WUG5 538 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 CASP10Q92851 521 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 RXFP1Q9HBX9 757 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 NUB1Q9Y5A7 615 aa18.49■□□□□ 0.55
VPS52-215ENST00000464425 DLL1O00548 723 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 TGFB1I1O43294 461 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 TRAPPC3O43617 180 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 EXTL3O43909 919 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 CYP3A5P20815 502 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 TMEM132DQ14C87 1099 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 PPFIBP1Q86W92 1011 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 KIAA0895Q8NCT3 520 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 GSDMAQ96QA5 445 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 TSPAN18Q96SJ8 248 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 ASB7Q9H672 318 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 UBE4BO95155 1302 aa18.48■□□□□ 0.55
VPS52-215ENST00000464425 CLIC2O15247 247 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 MBTPS2O43462 519 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 XPOTO43592 962 aaKnown RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 SMC2O95347 1197 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 LDHAP00338 332 aaKnown RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 ADH1AP07327 375 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 TKTP29401 623 aaKnown RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 CLCN4P51793 760 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 SMAD4Q13485 552 aaKnown RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 PNOCQ13519 176 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 KCNB1Q14721 858 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 KNOP1Q1ED39 458 aaKnown RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 SPATA1Q5VX52 437 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 SYCE2Q6PIF2 218 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 PALB2Q86YC2 1186 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 GPD1LQ8N335 351 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 C12orf76Q8N812 135 aaPredicted RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 BEST2Q8NFU1 509 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 LNX1Q8TBB1 728 aaPredicted RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 CCDC47Q96A33 483 aaKnown RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 UHRF1Q96T88 793 aaPredicted RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.47■□□□□ 0.55
VPS52-215ENST00000464425 AGPAT3Q9NRZ7 376 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 RBAKQ9NYW8 714 aaPredicted RBP18.47■□□□□ 0.55
VPS52-215ENST00000464425 HSPBP1Q9NZL4 362 aa18.47■□□□□ 0.55
VPS52-215ENST00000464425 RHOBTB3O94955 611 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms