RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 DDX27Q96GQ7 796 aaKnown RBP14.13□□□□□ -0.15
XRN1-203ENST00000463916 POP1Q99575 1024 aaKnown RBP14.13□□□□□ -0.15
XRN1-203ENST00000463916 CUEDC2Q9H467 287 aa14.13□□□□□ -0.15
XRN1-203ENST00000463916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.13□□□□□ -0.15
XRN1-203ENST00000463916 PI4K2BG5E9Z4 385 aa14.12□□□□□ -0.15
XRN1-203ENST00000463916 GLUD1P00367 558 aa14.12□□□□□ -0.15
XRN1-203ENST00000463916 ABCD1P33897 745 aa14.12□□□□□ -0.15
XRN1-203ENST00000463916 ELAVL2Q12926 359 aaKnown RBP14.12□□□□□ -0.15
XRN1-203ENST00000463916 PSMD5Q16401 504 aa14.12□□□□□ -0.15
XRN1-203ENST00000463916 L1TD1Q5T7N2 865 aaKnown RBP14.12□□□□□ -0.15
XRN1-203ENST00000463916 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.12□□□□□ -0.15
XRN1-203ENST00000463916 RNF135Q8IUD6 432 aa14.12□□□□□ -0.15
XRN1-203ENST00000463916 HVCN1Q96D96 273 aa14.12□□□□□ -0.15
XRN1-203ENST00000463916 KIF12Q96FN5 646 aa14.12□□□□□ -0.15
XRN1-203ENST00000463916 RPF1Q9H9Y2 349 aaKnown RBP14.12□□□□□ -0.15
XRN1-203ENST00000463916 AGO2Q9UKV8 859 aaKnown RBP14.12□□□□□ -0.15
XRN1-203ENST00000463916 KCNH3Q9ULD8 1083 aa14.12□□□□□ -0.15
XRN1-203ENST00000463916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.11□□□□□ -0.15
XRN1-203ENST00000463916 PRPF6O94906 941 aaKnown RBP14.11□□□□□ -0.15
XRN1-203ENST00000463916 RPL9P32969 192 aaKnown RBP14.11□□□□□ -0.15
XRN1-203ENST00000463916 HOXD13P35453 343 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 PPP2R3AQ06190 1150 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 GPR149Q86SP6 731 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 CCDC65Q8IXS2 484 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 GRAMD1CQ8IYS0 662 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 C7orf25Q9BPX7 421 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 BLZF1Q9H2G9 400 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 SFXN1Q9H9B4 322 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 C11orf16Q9NQ32 467 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 MUTYHQ9UIF7 546 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 PCDHB13Q9Y5F0 798 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 A0A1B0GVL5 298 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 JADE1Q6IE81 842 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 SLFN12LQ6IEE8 588 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 CNNM4Q6P4Q7 775 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 POMGNT1Q8WZA1 660 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 SPATA32Q96LK8 384 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 ACCSQ96QU6 501 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 FAM13BQ9NYF5 915 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 TCHHQ07283 1943 aa14.11□□□□□ -0.15
XRN1-203ENST00000463916 CCDC195A0A1B0GUA6 201 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 PPEF2O14830 753 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 TRAPPC3O43617 180 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 NFICP08651 508 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 AFMP43652 599 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 WNT7BP56706 349 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 ASIC1P78348 528 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 KRT85P78386 507 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 CUL4BQ13620 913 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 KYAT1Q16773 422 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 ATAT1Q5SQI0 421 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 C2orf16Q68DN1 1984 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 WDFY4Q6ZS81 3184 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 MTRRQ9UBK8 725 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 SERTAD1Q9UHV2 236 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 SPDYE4A6NLX3 237 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 ACTN4O43707 911 aaKnown RBP14.1□□□□□ -0.15
XRN1-203ENST00000463916 PFKFB1P16118 471 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 LRPAP1P30533 357 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 OR1D2P34982 312 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 MTHFRP42898 656 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 AMPD3Q01432 767 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 EHHADHQ08426 723 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 BECN1Q14457 450 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 KREMEN2Q8NCW0 462 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 ZNF707Q96C28 371 aaPredicted RBP14.1□□□□□ -0.15
XRN1-203ENST00000463916 RIPOR3Q96MK2 946 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 NECTIN4Q96NY8 510 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 CBWD1Q9BRT8 395 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 LRRC27Q9C0I9 530 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 GDPD2Q9HCC8 539 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 NUB1Q9Y5A7 615 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 CDY1Q9Y6F8 540 aa14.1□□□□□ -0.15
XRN1-203ENST00000463916 MTCL1Q9Y4B5 1905 aaKnown RBP14.09□□□□□ -0.15
XRN1-203ENST00000463916 ANK1P16157 1881 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 FAM86C2PA6NEL3 165 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 CYP3A5P20815 502 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 CMA1P23946 247 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 CREMQ03060 361 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 VARS2Q5ST30 1063 aaKnown RBP14.09□□□□□ -0.15
XRN1-203ENST00000463916 SPATA1Q5VX52 437 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 C15orf39Q6ZRI6 1047 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 SYCP3Q8IZU3 236 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 SAAL1Q96ER3 474 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 SUSD3Q96L08 255 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 FAM213AQ9BRX8 229 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 PLEKHA4Q9H4M7 779 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 UBQLN1Q9UMX0 589 aaKnown RBP14.09□□□□□ -0.15
XRN1-203ENST00000463916 EXOC7Q9UPT5 735 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 HPSEQ9Y251 543 aa14.09□□□□□ -0.15
XRN1-203ENST00000463916 C2CD4DB7Z1M9 353 aa14.08□□□□□ -0.15
XRN1-203ENST00000463916 DCXO43602 365 aa14.08□□□□□ -0.15
XRN1-203ENST00000463916 TBC1D4O60343 1298 aa14.08□□□□□ -0.15
XRN1-203ENST00000463916 C1RP00736 705 aa14.08□□□□□ -0.15
XRN1-203ENST00000463916 MCM4P33991 863 aa14.08□□□□□ -0.15
XRN1-203ENST00000463916 ALCAMQ13740 583 aa14.08□□□□□ -0.15
XRN1-203ENST00000463916 RAB33AQ14088 237 aa14.08□□□□□ -0.15
XRN1-203ENST00000463916 MRPL58Q14197 206 aaKnown RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms