RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 LIN9Q5TKA1 542 aa13□□□□□ -0.33
RTCB-202ENST00000463455 CEP57Q86XR8 500 aa13□□□□□ -0.33
RTCB-202ENST00000463455 PALB2Q86YC2 1186 aa13□□□□□ -0.33
RTCB-202ENST00000463455 FBXL6Q8N531 539 aa13□□□□□ -0.33
RTCB-202ENST00000463455 HASPINQ8TF76 798 aa13□□□□□ -0.33
RTCB-202ENST00000463455 SMG7Q92540 1137 aaKnown RBP13□□□□□ -0.33
RTCB-202ENST00000463455 RABGGTAQ92696 567 aa13□□□□□ -0.33
RTCB-202ENST00000463455 PBXIP1Q96AQ6 731 aa13□□□□□ -0.33
RTCB-202ENST00000463455 B3GALT6Q96L58 329 aa13□□□□□ -0.33
RTCB-202ENST00000463455 PLIN2Q99541 437 aa13□□□□□ -0.33
RTCB-202ENST00000463455 CXCL16Q9H2A7 254 aa13□□□□□ -0.33
RTCB-202ENST00000463455 ST6GALNAC4Q9H4F1 302 aa13□□□□□ -0.33
RTCB-202ENST00000463455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13□□□□□ -0.33
RTCB-202ENST00000463455 IGSF9Q9P2J2 1179 aa13□□□□□ -0.33
RTCB-202ENST00000463455 EPS15L1Q9UBC2 864 aa13□□□□□ -0.33
RTCB-202ENST00000463455 CCDC39Q9UFE4 941 aa13□□□□□ -0.33
RTCB-202ENST00000463455 ZFP37Q9Y6Q3 630 aaPredicted RBP13□□□□□ -0.33
RTCB-202ENST00000463455 TRAK2O60296 914 aa12.99□□□□□ -0.33
RTCB-202ENST00000463455 TBCAO75347 108 aaKnown RBP12.99□□□□□ -0.33
RTCB-202ENST00000463455 SP100P23497 879 aaPredicted RBP12.99□□□□□ -0.33
RTCB-202ENST00000463455 KARSQ15046 597 aaKnown RBP12.99□□□□□ -0.33
RTCB-202ENST00000463455 KANK3Q6NY19 840 aa12.99□□□□□ -0.33
RTCB-202ENST00000463455 PRSS55Q6UWB4 352 aaPredicted RBP12.99□□□□□ -0.33
RTCB-202ENST00000463455 SNX21Q969T3 373 aa12.99□□□□□ -0.33
RTCB-202ENST00000463455 ZNF707Q96C28 371 aaPredicted RBP12.99□□□□□ -0.33
RTCB-202ENST00000463455 BICD1Q96G01 975 aa12.99□□□□□ -0.33
RTCB-202ENST00000463455 ANKFY1Q9P2R3 1169 aa12.99□□□□□ -0.33
RTCB-202ENST00000463455 CACNG4Q9UBN1 327 aa12.99□□□□□ -0.33
RTCB-202ENST00000463455 SEL1LQ9UBV2 794 aa12.99□□□□□ -0.33
RTCB-202ENST00000463455 TBX20Q9UMR3 447 aa12.99□□□□□ -0.33
RTCB-202ENST00000463455 PDCD11Q14690 1871 aaKnown RBP12.99□□□□□ -0.33
RTCB-202ENST00000463455 K7ENM7 598 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 PODXLO00592 558 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 HNRNPDLO14979 420 aaKnown RBP12.98□□□□□ -0.33
RTCB-202ENST00000463455 XPOTO43592 962 aaKnown RBP12.98□□□□□ -0.33
RTCB-202ENST00000463455 STX6O43752 255 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 XYLBO75191 536 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 RFPL2O75678 378 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 KRT18P05783 430 aaKnown RBP12.98□□□□□ -0.33
RTCB-202ENST00000463455 ADRB2P07550 413 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 RPL17P18621 184 aaKnown RBP12.98□□□□□ -0.33
RTCB-202ENST00000463455 CYP3A5P20815 502 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 PAX3P23760 479 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 LIG4P49917 911 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 OSTNP61366 133 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 GTF2BQ00403 316 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 POU5F1Q01860 360 aaKnown RBP12.98□□□□□ -0.33
RTCB-202ENST00000463455 GRIN1Q05586 938 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 SOX4Q06945 474 aaPredicted RBP12.98□□□□□ -0.33
RTCB-202ENST00000463455 MCM6Q14566 821 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 SLC10A6Q3KNW5 377 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 CD300LGQ6UXG3 332 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 CD302Q8IX05 232 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 MYCT1Q8N699 235 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 KRI1Q8N9T8 703 aaKnown RBP12.98□□□□□ -0.33
RTCB-202ENST00000463455 LRRC15Q8TF66 581 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 HVCN1Q96D96 273 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 ZMAT2Q96NC0 199 aaKnown RBP12.98□□□□□ -0.33
RTCB-202ENST00000463455 OXCT2Q9BYC2 517 aaPredicted RBP12.98□□□□□ -0.33
RTCB-202ENST00000463455 PIDD1Q9HB75 910 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 LIMD1Q9UGP4 676 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 FBXO2Q9UK22 296 aaPredicted RBP12.98□□□□□ -0.33
RTCB-202ENST00000463455 MAFFQ9ULX9 164 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 MTMR6Q9Y217 621 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 CLIC4Q9Y696 253 aa12.98□□□□□ -0.33
RTCB-202ENST00000463455 DOCK8Q8NF50 2099 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 CACNA1HO95180 2353 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 NPHP3-ACAD11A0A0J9YXS1 232 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 TTC26A0AVF1 554 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 H7C4K7 107 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 OGTO15294 1046 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 C8AP07357 584 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 HARSP12081 509 aaKnown RBP12.97□□□□□ -0.33
RTCB-202ENST00000463455 LRPAP1P30533 357 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 OR1D2P34982 312 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 NASPP49321 788 aaPredicted RBP12.97□□□□□ -0.33
RTCB-202ENST00000463455 PPP2R3AQ06190 1150 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 TDGQ13569 410 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 SLC39A14Q15043 492 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 PPM1LQ5SGD2 360 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 SLC8B1Q6J4K2 584 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 CCDC73Q6ZRK6 1079 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 C3orf58Q8NDZ4 430 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 APPL2Q8NEU8 664 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 ZBTB45Q96K62 511 aaPredicted RBP12.97□□□□□ -0.33
RTCB-202ENST00000463455 SUSD3Q96L08 255 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 FIZ1Q96SL8 496 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 GOLGA2P5Q9HBQ8 144 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 UBQLN1Q9UMX0 589 aaKnown RBP12.97□□□□□ -0.33
RTCB-202ENST00000463455 DUSP12Q9UNI6 340 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 NUB1Q9Y5A7 615 aa12.97□□□□□ -0.33
RTCB-202ENST00000463455 A0A0B4J269 797 aa12.96□□□□□ -0.33
RTCB-202ENST00000463455 FAM189A1O60320 539 aa12.96□□□□□ -0.33
RTCB-202ENST00000463455 SPATA31D3P0C874 917 aa12.96□□□□□ -0.33
RTCB-202ENST00000463455 TKTP29401 623 aaKnown RBP12.96□□□□□ -0.33
RTCB-202ENST00000463455 MARCKSP29966 332 aaPredicted RBP12.96□□□□□ -0.33
RTCB-202ENST00000463455 GBP2P32456 591 aaPredicted RBP12.96□□□□□ -0.33
RTCB-202ENST00000463455 MATR3P43243 847 aaKnown RBP eCLIP12.96□□□□□ -0.33
RTCB-202ENST00000463455 MRPL58Q14197 206 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms