RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 OFD1O75665 1012 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 RECQL4O94761 1208 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 CLSTN1O94985 981 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 PTMAP06454 111 aaKnown RBP7.97□□□□□ -1.13
EPHA4-210ENST00000463446 KRT19P08727 400 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 CXCL8P10145 99 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 ATP1A3P13637 1013 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 LRPAP1P30533 357 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 PIK3CAP42336 1068 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 GCLMP48507 274 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 LHX1P48742 406 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 ZNF75DP51815 510 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 TNNC1P63316 161 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 GCNT1Q02742 428 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 KRT17Q04695 432 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 NCOA4Q13772 614 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 SYCP1Q15431 976 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 ZNF667Q5HYK9 610 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 MIIPQ5JXC2 388 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 EEF1DP3Q658K8 133 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 ZNF598Q86UK7 904 aaKnown RBP7.97□□□□□ -1.13
EPHA4-210ENST00000463446 C7orf61Q8IZ16 206 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 THEM5Q8N1Q8 247 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 TMEM86AQ8N2M4 240 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 RNF169Q8NCN4 708 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 SMG8Q8ND04 991 aaKnown RBP7.97□□□□□ -1.13
EPHA4-210ENST00000463446 CCDC112Q8NEF3 446 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 APPL2Q8NEU8 664 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 PPP1R13LQ8WUF5 828 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 HERVK_113Q902F9 699 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 BADQ92934 168 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 WNT8BQ93098 351 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 TRIM44Q96DX7 344 aaPredicted RBP7.97□□□□□ -1.13
EPHA4-210ENST00000463446 EEF2KMTQ96G04 330 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 SCLYQ96I15 445 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 SNX27Q96L92 541 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 SPAG5Q96R06 1193 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 EIF2AQ9BY44 585 aaKnown RBP7.97□□□□□ -1.13
EPHA4-210ENST00000463446 STK33Q9BYT3 514 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 TAB2Q9NYJ8 693 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 CEP72Q9P209 647 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 APEX2Q9UBZ4 518 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 PUF60Q9UHX1 559 aaKnown RBP7.97□□□□□ -1.13
EPHA4-210ENST00000463446 CAPN11Q9UMQ6 739 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 FAN1Q9Y2M0 1017 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 NUB1Q9Y5A7 615 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 PCDHB12Q9Y5F1 795 aa7.97□□□□□ -1.13
EPHA4-210ENST00000463446 CEP350Q5VT06 3117 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 LRRIQ3A6PVS8 624 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-210ENST00000463446 ZBBXA8MT70 800 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 KPNA7A9QM74 516 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 AKR1B15C9JRZ8 316 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-210ENST00000463446 MED7O43513 233 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 HUS1O60921 280 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 TADA2AO75478 443 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 DGKIO75912 1065 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 IPO7O95373 1038 aaKnown RBP7.96□□□□□ -1.14
EPHA4-210ENST00000463446 LAG3P18627 525 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 AKAP5P24588 427 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 PON1P27169 355 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 ANXA13P27216 316 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 PPM1AP35813 382 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 STAT1P42224 750 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 TAF6P49848 677 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 SLC8A3P57103 927 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 ZBED6P86452 979 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 PTK2Q05397 1052 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 SMARCB1Q12824 385 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 STILQ15468 1287 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 MAPRE1Q15691 268 aaKnown RBP7.96□□□□□ -1.14
EPHA4-210ENST00000463446 HS1BP3Q53T59 392 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 HSP90AA4PQ58FG1 418 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 KLHDC7AQ5VTJ3 777 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 JADE1Q6IE81 842 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 AGMOQ6ZNB7 445 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 C15orf39Q6ZRI6 1047 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 RTN4RL1Q86UN2 441 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-210ENST00000463446 VSTM4Q8IW00 320 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 GPR65Q8IYL9 337 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 CMTR2Q8IYT2 770 aaKnown RBP7.96□□□□□ -1.14
EPHA4-210ENST00000463446 LRRC43Q8N309 656 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 UBE2Q2Q8WVN8 375 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 HPDLQ96IR7 371 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 TNIP3Q96KP6 325 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 NAP1L5Q96NT1 182 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-210ENST00000463446 SAMD11Q96NU1 681 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 YME1L1Q96TA2 773 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 GAD1Q99259 594 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 RAD9AQ99638 391 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 APOL6Q9BWW8 343 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 HAPLN2Q9GZV7 340 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 WNT8AQ9H1J5 351 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 HSD3B7Q9H2F3 369 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 NXF3Q9H4D5 531 aaKnown RBP7.96□□□□□ -1.14
EPHA4-210ENST00000463446 GDAP2Q9NXN4 497 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 GCNT4Q9P109 453 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 AGAP1Q9UPQ3 857 aa7.96□□□□□ -1.14
EPHA4-210ENST00000463446 FRMPD3Q5JV73 1810 aa7.95□□□□□ -1.14
EPHA4-210ENST00000463446 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.95□□□□□ -1.14
EPHA4-210ENST00000463446 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms