RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 NUB1Q9Y5A7 615 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 CLUHO75153 1309 aa7.95□□□□□ -1.14
PTPRF-210ENST00000463041 A0A0B4J269 797 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 TTC26A0AVF1 554 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 K7ELQ4 463 aaPredicted RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 OGTO15294 1046 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 ADAM12O43184 909 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 STX6O43752 255 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 TBC1D4O60343 1298 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 N4BP1O75113 896 aaKnown RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 ABLIM3O94929 683 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 C8AP07357 584 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 ADRB2P07550 413 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 HARSP12081 509 aaKnown RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 LAMP2P13473 410 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 CYP3A5P20815 502 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 PAX3P23760 479 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 TKTP29401 623 aaKnown RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 MARCKSP29966 332 aaPredicted RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 ELF1P32519 619 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 TXLNAP40222 546 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 BRCC3P46736 316 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 LIG4P49917 911 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 CLCN5P51795 746 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 POU5F1Q01860 360 aaKnown RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 CACNB1Q02641 598 aaPredicted RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 SLC39A14Q15043 492 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 IER5LQ5T953 404 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 RRAGBQ5VZM2 374 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 SLFN12LQ6IEE8 588 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 SLC8B1Q6J4K2 584 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 USP49Q70CQ1 688 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 SV2BQ7L1I2 683 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 ZNF720Q7Z2F6 126 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 SLC44A3Q8N4M1 653 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 C3orf58Q8NDZ4 430 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 APPL2Q8NEU8 664 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 ZNF461Q8TAF7 563 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 LRRC15Q8TF66 581 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 SNX21Q969T3 373 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 C18orf25Q96B23 403 aaPredicted RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 SUSD3Q96L08 255 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 MYADMQ96S97 322 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 OXCT2Q9BYC2 517 aaPredicted RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 HAPLN2Q9GZV7 340 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 ZHX3Q9H4I2 956 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 RPF1Q9H9Y2 349 aaKnown RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 GOLGA2P5Q9HBQ8 144 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 ANKFY1Q9P2R3 1169 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 SEL1LQ9UBV2 794 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 WNT16Q9UBV4 365 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 STK17AQ9UEE5 414 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 FBXO2Q9UK22 296 aaPredicted RBP7.94□□□□□ -1.14
PTPRF-210ENST00000463041 MAFFQ9ULX9 164 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 MTMR6Q9Y217 621 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 CDY1Q9Y6F8 540 aa7.94□□□□□ -1.14
PTPRF-210ENST00000463041 LACTBL1A8MY62 500 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 I3L4J1 428 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 K7ENM7 598 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 HNRNPDLO14979 420 aaKnown RBP7.93□□□□□ -1.14
PTPRF-210ENST00000463041 MEFVO15553 781 aaPredicted RBP7.93□□□□□ -1.14
PTPRF-210ENST00000463041 TBCAO75347 108 aaKnown RBP7.93□□□□□ -1.14
PTPRF-210ENST00000463041 ATF2P15336 505 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 FSHRP23945 695 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 LRPAP1P30533 357 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 PTPN5P54829 565 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 NHLH1Q02575 133 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 POSTNQ15063 836 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 SEZ6Q53EL9 994 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 SPECC1Q5M775 1068 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 VARS2Q5ST30 1063 aaKnown RBP7.93□□□□□ -1.14
PTPRF-210ENST00000463041 TPGS2Q68CL5 300 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 ASTLQ6HA08 431 aaPredicted RBP7.93□□□□□ -1.14
PTPRF-210ENST00000463041 FAM173BQ6P4H8 233 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 RSPO2Q6UXX9 243 aaPredicted RBP7.93□□□□□ -1.14
PTPRF-210ENST00000463041 CCDC73Q6ZRK6 1079 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 GRASPQ7Z6J2 395 aaPredicted RBP7.93□□□□□ -1.14
PTPRF-210ENST00000463041 KIF12Q96FN5 646 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 CLIC6Q96NY7 704 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 FIZ1Q96SL8 496 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 MFSD1Q9H3U5 465 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 AVENQ9NQS1 362 aaPredicted RBP7.93□□□□□ -1.14
PTPRF-210ENST00000463041 KCNH3Q9ULD8 1083 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 UBQLN1Q9UMX0 589 aaKnown RBP7.93□□□□□ -1.14
PTPRF-210ENST00000463041 PCDHB8Q9UN66 801 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 DUSP12Q9UNI6 340 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 STYXL1Q9Y6J8 313 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 SCN1AP35498 2009 aa7.93□□□□□ -1.14
PTPRF-210ENST00000463041 RIF1Q5UIP0 2472 aaKnown RBP7.92□□□□□ -1.14
PTPRF-210ENST00000463041 ANK1P16157 1881 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 ARHGEF37A1IGU5 675 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 ANHXE9PGG2 379 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 M0QZQ0 153 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 CCL16O15467 120 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 FAM189A1O60320 539 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 OAZ2O95190 189 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 PDGFBP01127 241 aaPredicted RBP7.92□□□□□ -1.14
PTPRF-210ENST00000463041 CXCL8P10145 99 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 GAP43P17677 238 aa7.92□□□□□ -1.14
PTPRF-210ENST00000463041 PTPN2P17706 415 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms