RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 CORO1BQ9BR76 489 aa17.26■□□□□ 0.35
SND1-203ENST00000463020 F5P12259 2224 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 MAP1BP46821 2468 aaKnown RBP17.25■□□□□ 0.35
SND1-203ENST00000463020 SMIM28A0A1B0GU29 152 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 ARHGEF37A1IGU5 675 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 EPB41L2O43491 1005 aaKnown RBP17.25■□□□□ 0.35
SND1-203ENST00000463020 ABLIM3O94929 683 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 GJA1P17302 382 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 CYP11B2P19099 503 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 MCM7P33993 719 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 NAMPTP43490 491 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 RBM25P49756 843 aaKnown RBP17.25■□□□□ 0.35
SND1-203ENST00000463020 ARPP19P56211 112 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 OSTNP61366 133 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 GAS6Q14393 721 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 SLC8B1Q6J4K2 584 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 PDXDC1Q6P996 788 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 ZNF852Q6ZMS4 543 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 DEPTORQ8TB45 409 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 ELSPBP1Q96BH3 223 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 RSPRY1Q96DX4 576 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 C2orf40Q9H1Z8 148 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 TUFT1Q9NNX1 390 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 GDE1Q9NZC3 331 aa17.25■□□□□ 0.35
SND1-203ENST00000463020 TICRRQ7Z2Z1 1910 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 VIPR2P41587 438 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 GUCY1B3Q02153 619 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 ADCY1Q08828 1119 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 ATF7IP2Q5U623 682 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 VITQ6UXI7 678 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 ALKAL1Q6UXT8 129 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 TAS1R3Q7RTX0 852 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 GTF3C6Q969F1 213 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 C18orf25Q96B23 403 aaPredicted RBP17.24■□□□□ 0.35
SND1-203ENST00000463020 POLR3CQ9BUI4 534 aaPredicted RBP17.24■□□□□ 0.35
SND1-203ENST00000463020 CDT1Q9H211 546 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 AVENQ9NQS1 362 aaPredicted RBP17.24■□□□□ 0.35
SND1-203ENST00000463020 C2orf42Q9NWW7 574 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 CEP72Q9P209 647 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 DAXXQ9UER7 740 aaPredicted RBP17.24■□□□□ 0.35
SND1-203ENST00000463020 USP18Q9UMW8 372 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.24■□□□□ 0.35
SND1-203ENST00000463020 FRYQ5TBA9 3013 aa17.24■□□□□ 0.35
SND1-203ENST00000463020 PTPN2P17706 415 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 MAGEA9P43362 315 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 SATB1Q01826 763 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 SPEM2Q0P670 501 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 SRSF5Q13243 272 aaKnown RBP17.23■□□□□ 0.35
SND1-203ENST00000463020 DCAF4L1Q3SXM0 396 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 XKR4Q5GH76 650 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 ANKS3Q6ZW76 656 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 MAP4K3Q8IVH8 894 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 ZNF461Q8TAF7 563 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 ASB16Q96NS5 453 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 NACC1Q96RE7 527 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 ADPGKQ9BRR6 497 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 CHRDQ9H2X0 955 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 INSL5Q9Y5Q6 135 aa17.23■□□□□ 0.35
SND1-203ENST00000463020 CHD6Q8TD26 2715 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 ARHGEF35A5YM69 484 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 PODXLO00592 558 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 ABLIM1O14639 778 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 PRRG1O14668 218 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 VNN2O95498 520 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 MRPL58Q14197 206 aaKnown RBP17.22■□□□□ 0.35
SND1-203ENST00000463020 DAW1Q8N136 415 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 WASF1Q92558 559 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 DNASE1L2Q92874 299 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 UPF2Q9HAU5 1272 aaKnown RBP17.22■□□□□ 0.35
SND1-203ENST00000463020 CYP4F11Q9HBI6 524 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 BRMS1Q9HCU9 246 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 ZNF334Q9HCZ1 680 aaPredicted RBP17.22■□□□□ 0.35
SND1-203ENST00000463020 PTPRHQ9HD43 1115 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 FBXL5Q9UKA1 691 aa17.22■□□□□ 0.35
SND1-203ENST00000463020 CDV3Q9UKY7 258 aaKnown RBP17.22■□□□□ 0.35
SND1-203ENST00000463020 ARNTLO00327 626 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 LRG1P02750 347 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 ATF2P15336 505 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 RPA1P27694 616 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 GDI1P31150 447 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 LMNB2Q03252 620 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 NBR1Q14596 966 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 ZNF174Q15697 407 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 GPIHBP1Q8IV16 184 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 TCEAL8Q8IYN2 117 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 UROC1Q96N76 676 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 NELL2Q99435 816 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 ACO2Q99798 780 aaKnown RBP17.21■□□□□ 0.35
SND1-203ENST00000463020 BRD9Q9H8M2 597 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 LMAN1LQ9HAT1 526 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 RBM12Q9NTZ6 932 aaKnown RBP17.21■□□□□ 0.35
SND1-203ENST00000463020 TNFSF13BQ9Y275 285 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 PIAS3Q9Y6X2 628 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 LAMA1P25391 3075 aa17.21■□□□□ 0.35
SND1-203ENST00000463020 GRM5P41594 1212 aa17.2■□□□□ 0.34
SND1-203ENST00000463020 SOX9P48436 509 aa17.2■□□□□ 0.34
SND1-203ENST00000463020 SEZ6Q53EL9 994 aa17.2■□□□□ 0.34
SND1-203ENST00000463020 Q6ZS52 159 aa17.2■□□□□ 0.34
SND1-203ENST00000463020 RTL10Q7L3V2 364 aa17.2■□□□□ 0.34
SND1-203ENST00000463020 TRMT61BQ9BVS5 477 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms