RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 ATF2P15336 505 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 KCNE1P15382 129 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 LIG1P18858 919 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 TGM1P22735 817 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 RPS9P46781 194 aaKnown RBP12.26□□□□□ -0.45
PTPN7-204ENST00000462815 NPTX2P47972 431 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 NEK4P51957 841 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 PFKPQ01813 784 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 TRIM29Q14134 588 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 UBXN2BQ14CS0 331 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 VARS2Q5ST30 1063 aaKnown RBP12.26□□□□□ -0.45
PTPN7-204ENST00000462815 TPRG1Q6ZUI0 275 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 TCEAL8Q8IYN2 117 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 TMEM130Q8N3G9 435 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 ERMNQ8TAM6 284 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 KIFAP3Q92845 792 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 ELSPBP1Q96BH3 223 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 TCEAL4Q96EI5 215 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 MCRS1Q96EZ8 462 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 BCO2Q9BYV7 579 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 FOXP1Q9H334 677 aaPredicted RBP12.26□□□□□ -0.45
PTPN7-204ENST00000462815 SPATA6Q9NWH7 488 aaPredicted RBP12.26□□□□□ -0.45
PTPN7-204ENST00000462815 CNTN3Q9P232 1028 aa12.26□□□□□ -0.45
PTPN7-204ENST00000462815 MRPS23Q9Y3D9 190 aaKnown RBP12.26□□□□□ -0.45
PTPN7-204ENST00000462815 PODXLO00592 558 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 SPTLC1O15269 473 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 MICAL2O94851 1124 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 SEC24BO95487 1268 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 VNN2O95498 520 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 MAGEA9P43362 315 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 TOB1P50616 345 aaPredicted RBP12.25□□□□□ -0.45
PTPN7-204ENST00000462815 IL17AQ16552 155 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 TTC38Q5R3I4 469 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 HAUS3Q68CZ6 603 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 KCNK18Q7Z418 384 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 FBXO18Q8NFZ0 1043 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 C18orf25Q96B23 403 aaPredicted RBP12.25□□□□□ -0.45
PTPN7-204ENST00000462815 BORCS6Q96GS4 357 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 MMTAG2Q9BU76 263 aaKnown RBP12.25□□□□□ -0.45
PTPN7-204ENST00000462815 RUSC1Q9BVN2 902 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 EPC1Q9H2F5 836 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 TMEM134Q9H6X4 195 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 HEBP1Q9NRV9 189 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 DDX19AQ9NUU7 478 aaKnown RBP12.25□□□□□ -0.45
PTPN7-204ENST00000462815 FBXL5Q9UKA1 691 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 PCDHGA2Q9Y5H1 932 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 LAMA1P25391 3075 aa12.25□□□□□ -0.45
PTPN7-204ENST00000462815 PP2D1A8MPX8 630 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 E9PMD0 336 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 K7ERI5 159 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 ARNTLO00327 626 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 SYN3O14994 580 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 LAMTOR5O43504 91 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 TRAPPC3O43617 180 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 KINO60870 393 aaKnown RBP12.24□□□□□ -0.45
PTPN7-204ENST00000462815 HIP1RO75146 1068 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 CCT6AP40227 531 aaKnown RBP12.24□□□□□ -0.45
PTPN7-204ENST00000462815 TRAPPC10P48553 1259 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 EPHA5P54756 1037 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 CSTF1Q05048 431 aaKnown RBP12.24□□□□□ -0.45
PTPN7-204ENST00000462815 PUM1Q14671 1186 aaKnown RBP eCLIP12.24□□□□□ -0.455e-6■□□□□ 10.2
PTPN7-204ENST00000462815 TMEM132AQ24JP5 1023 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 FAM78AQ5JUQ0 283 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 ZBTB41Q5SVQ8 909 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 TSSK4Q6SA08 328 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 C1orf186Q6ZWK4 172 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 DGLUCYQ7Z3D6 616 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 MAP4K3Q8IVH8 894 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 DNASE1L2Q92874 299 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 C8orf76Q96K31 380 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 IFT74Q96LB3 600 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 ZSWIM3Q96MP5 696 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 ASB16Q96NS5 453 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 TARS2Q9BW92 718 aaKnown RBP12.24□□□□□ -0.45
PTPN7-204ENST00000462815 KIAA1024Q9UPX6 916 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 INSL5Q9Y5Q6 135 aa12.24□□□□□ -0.45
PTPN7-204ENST00000462815 TICRRQ7Z2Z1 1910 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 MCF2P10911 925 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 PTPN2P17706 415 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 U2AF2P26368 475 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTPN7-204ENST00000462815 PEX3P56589 373 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 OSTNP61366 133 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 MTAPQ13126 283 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 PDIA5Q14554 519 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 SLC10A6Q3KNW5 377 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 ZNF568Q3ZCX4 644 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 WDR44Q5JSH3 913 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 RINT1Q6NUQ1 792 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 VITQ6UXI7 678 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 MAMSTRQ6ZN01 415 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 CCDC83Q8IWF9 413 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 BEST2Q8NFU1 509 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 ZBTB45Q96K62 511 aaPredicted RBP12.23□□□□□ -0.45
PTPN7-204ENST00000462815 SUSD3Q96L08 255 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 LLPHQ9BRT6 129 aaKnown RBP12.23□□□□□ -0.45
PTPN7-204ENST00000462815 NTPCRQ9BSD7 190 aaKnown RBP12.23□□□□□ -0.45
PTPN7-204ENST00000462815 CCDC94Q9BW85 323 aaPredicted RBP12.23□□□□□ -0.45
PTPN7-204ENST00000462815 LRRC3Q9BY71 257 aa12.23□□□□□ -0.45
PTPN7-204ENST00000462815 MRPL4Q9BYD3 311 aaKnown RBP12.23□□□□□ -0.45
PTPN7-204ENST00000462815 HAPLN2Q9GZV7 340 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms