RNA–Protein interactions for RNA: ENST00000462440.5

PRUNE1-208, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 5

Gene PRUNE1, Length 732 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-208ENST00000462440 EEF1GP26641 437 aaKnown RBP18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 PBX2P40425 430 aa18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 MTIF2P46199 727 aaKnown RBP18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 PPP3CAQ08209 521 aa18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 TCP11X2Q5H9J9 407 aa18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 COLGALT2Q8IYK4 626 aa18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 RNF214Q8ND24 703 aa18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 CACTINQ8WUQ7 758 aaKnown RBP18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 ANKRD36BP1Q96IX9 119 aa18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 PBX4Q9BYU1 374 aa18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 YBX2Q9Y2T7 364 aaKnown RBP18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 RANBP2P49792 3224 aaKnown RBP18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 COL4A4P53420 1690 aaPredicted RBP18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 ATG2AQ2TAZ0 1938 aa18.59■□□□□ 0.57
PRUNE1-208ENST00000462440 CASTOR2A6NHX0 329 aa18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 ZC3H11AO75152 810 aaKnown RBP eCLIP18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 TNNC2P02585 160 aa18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 GCLMP48507 274 aa18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 DUOXA2Q1HG44 320 aa18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 GAS2L3Q86XJ1 694 aa18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 C1orf127Q8N9H9 656 aa18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 PAAF1Q9BRP4 392 aa18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 MMRN2Q9H8L6 949 aa18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 DPP3Q9NY33 737 aa18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.58■□□□□ 0.56
PRUNE1-208ENST00000462440 LINC01553A4QN01 128 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 GOLGA6L19H0YKK7 550 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 STX10O60499 249 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 ARHGEF15O94989 841 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 CA3P07451 260 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 LINC00271P0C7V0 271 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 ATP1A3P13637 1013 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 SLC11A1P49279 550 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 AP3M2P53677 418 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 BCAR1P56945 870 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 RAB30Q15771 203 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 SPOUT1Q5T280 376 aaKnown RBP18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 TDRD10Q5VZ19 366 aaKnown RBP18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 C15orf39Q6ZRI6 1047 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 TRAPPC11Q7Z392 1133 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 RABGGTAQ92696 567 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 UROC1Q96N76 676 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 TMEM175Q9BSA9 504 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 TUBGCP2Q9BSJ2 902 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 ITGA11Q9UKX5 1188 aa18.57■□□□□ 0.56
PRUNE1-208ENST00000462440 C4BPAP04003 597 aaKnown RBP18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 ITGB3P05106 788 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 LAG3P18627 525 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 LRPAP1P30533 357 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 GTF2H1P32780 548 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 PBX3P40426 434 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 OR1G1P47890 313 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 CLCNKBP51801 687 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 TPM4P67936 248 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 SMAD3P84022 425 aaKnown RBP18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 KCNH2Q12809 1159 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 BIRC3Q13489 604 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 KRT31Q15323 416 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 MAN2A1Q16706 1144 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 ZACNQ401N2 412 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 SCARA3Q6AZY7 606 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 COLGALT1Q8NBJ5 622 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 CXorf38Q8TB03 319 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 CLP1Q92989 425 aaKnown RBP18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 TMEM8AQ9HCN3 771 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 TAB2Q9NYJ8 693 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 LIMA1Q9UHB6 759 aaKnown RBP18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 SIX4Q9UIU6 781 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 MSRAQ9UJ68 235 aa18.56■□□□□ 0.56
PRUNE1-208ENST00000462440 ANO9A1A5B4 782 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 PODXLO00592 558 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 NRP1O14786 923 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 PPEF2O14830 753 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 AFPP02771 609 aaKnown RBP18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 GALTP07902 379 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 PRKCSHP14314 528 aaPredicted RBP18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 CDK11BP21127 795 aaKnown RBP18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 POLR2BP30876 1174 aaKnown RBP18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 RPL9P32969 192 aaKnown RBP18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 FMO5P49326 533 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 MXI1P50539 228 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 UPP1Q16831 310 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 LRIT3Q3SXY7 679 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 CBWD6Q4V339 395 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 CBWD3Q5JTY5 395 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 MIIPQ5JXC2 388 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 CBWD5Q5RIA9 395 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 C9orf57Q5W0N0 161 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 KCNT2Q6UVM3 1135 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 SV2AQ7L0J3 742 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 DDX27Q96GQ7 796 aaKnown RBP18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 ZNF558Q96NG5 402 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 RBSNQ9H1K0 784 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 NKX2-4Q9H2Z4 354 aa18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 PRG3Q9Y2Y8 225 aaPredicted RBP18.55■□□□□ 0.56
PRUNE1-208ENST00000462440 LAMA2P24043 3122 aaKnown RBP18.54■□□□□ 0.56
PRUNE1-208ENST00000462440 NT5C1B-RDH14C9J2C7 533 aa18.54■□□□□ 0.56
PRUNE1-208ENST00000462440 F8W810 466 aa18.54■□□□□ 0.56
PRUNE1-208ENST00000462440 PHACTR2O75167 634 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms