RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 KRT85P78386 507 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 NFATC3Q12968 1075 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 MTMR1Q13613 665 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 ARHGEF6Q15052 776 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 TTLL5Q6EMB2 1281 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 SLFN12LQ6IEE8 588 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 KIAA1841Q6NSI8 718 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 CNKSR3Q6P9H4 555 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 ATG14Q6ZNE5 492 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 ANKRD18AQ8IVF6 992 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 TMEM151BQ8IW70 566 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 FAM43AQ8N2R8 423 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 CCDC191Q8NCU4 936 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 TEPSINQ96N21 525 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 TUBGCP5Q96RT8 1024 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 GDF15Q99988 308 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 AMNQ9BXJ7 453 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 OR10A5Q9H207 317 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 KCND1Q9NSA2 647 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 UCKL1Q9NWZ5 548 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 MSRAQ9UJ68 235 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 CNOT6Q9ULM6 557 aaKnown RBP6.03□□□□□ -1.44
COPS3-204ENST00000462236 STXBP5LQ9Y2K9 1186 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 MUC6Q6W4X9 2439 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 LTBP2Q14767 1821 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 DOCK2Q92608 1830 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 ATAD5Q96QE3 1844 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 RLFQ13129 1914 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 MYH2Q9UKX2 1941 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 SH3D21A4FU49 640 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 KRT1P04264 644 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 KLRK1P26718 216 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 MC4RP32245 332 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 FKBP1AP62942 108 aaKnown RBP6.02□□□□□ -1.45
COPS3-204ENST00000462236 SLC6A3Q01959 620 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 ITKQ08881 620 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 KLF1Q13351 362 aaPredicted RBP6.02□□□□□ -1.45
COPS3-204ENST00000462236 SUPT20HL1Q3ZLR7 823 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 PRR31Q5SQ13 230 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 OGFOD2Q6N063 350 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 C17orf99Q6UX52 265 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 C15orf52Q6ZUT6 534 aaKnown RBP6.02□□□□□ -1.45
COPS3-204ENST00000462236 CXorf67Q86X51 503 aaPredicted RBP6.02□□□□□ -1.45
COPS3-204ENST00000462236 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.02□□□□□ -1.45
COPS3-204ENST00000462236 FNIP1Q8TF40 1166 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 SSH1Q8WYL5 1049 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 ERCC4Q92889 916 aaPredicted RBP6.02□□□□□ -1.45
COPS3-204ENST00000462236 ZBTB8AQ96BR9 441 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 OPTNQ96CV9 577 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 PRMT6Q96LA8 375 aaPredicted RBP6.02□□□□□ -1.45
COPS3-204ENST00000462236 HTATIP2Q9BUP3 242 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 ASPSCR1Q9BZE9 553 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 HYPKQ9NX55 129 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 MTMR10Q9NXD2 777 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 DBF4Q9UBU7 674 aaPredicted RBP6.02□□□□□ -1.45
COPS3-204ENST00000462236 SRRDQ9UH36 339 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 ZFP69BQ9UJL9 534 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 SMG5Q9UPR3 1016 aaKnown RBP6.02□□□□□ -1.45
COPS3-204ENST00000462236 KCTD3Q9Y597 815 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 NUMBLQ9Y6R0 609 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 MAST2Q6P0Q8 1798 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 SMCHD1A6NHR9 2005 aa6.02□□□□□ -1.45
COPS3-204ENST00000462236 DOCK1Q14185 1865 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 CCL15-CCL14A0A0B4J2E2 113 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 TRIM75PA6NK02 468 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 KATNA1O75449 491 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 PRPF6O94906 941 aaKnown RBP6.01□□□□□ -1.45
COPS3-204ENST00000462236 CFBP00751 764 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 CAPN2P17655 700 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 RPL13P26373 211 aaKnown RBP6.01□□□□□ -1.45
COPS3-204ENST00000462236 TMPOP42166 694 aaKnown RBP6.01□□□□□ -1.45
COPS3-204ENST00000462236 LIMS1P48059 325 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 CTSWP56202 376 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 ADCY2Q08462 1091 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 MAP3K12Q12852 859 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 DLGAP5Q15398 846 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 PKN1Q16512 942 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 FSCN1Q16658 493 aaKnown RBP6.01□□□□□ -1.45
COPS3-204ENST00000462236 CCL15Q16663 113 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 INAVAQ3KP66 663 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 PLEKHG6Q3KR16 790 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 LRIT3Q3SXY7 679 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 CCDC178Q5BJE1 867 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 KANK2Q63ZY3 851 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 COG1Q8WTW3 980 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 LMBR1Q8WVP7 490 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 NOX5Q96PH1 765 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 CDC5LQ99459 802 aaKnown RBP6.01□□□□□ -1.45
COPS3-204ENST00000462236 IRF2BPLQ9H1B7 796 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 EPB41L4AQ9HCS5 686 aaPredicted RBP6.01□□□□□ -1.45
COPS3-204ENST00000462236 CD209Q9NNX6 404 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 TOPORSQ9NS56 1045 aaPredicted RBP6.01□□□□□ -1.45
COPS3-204ENST00000462236 RBPJLQ9UBG7 517 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 NR2E3Q9Y5X4 410 aa6.01□□□□□ -1.45
COPS3-204ENST00000462236 ZNFX1Q9P2E3 1918 aaKnown RBP6□□□□□ -1.45
COPS3-204ENST00000462236 BTBD19C9JJ37 291 aa6□□□□□ -1.45
COPS3-204ENST00000462236 CUTAO60888 179 aa6□□□□□ -1.45
COPS3-204ENST00000462236 IL18BPO95998 194 aa6□□□□□ -1.45
COPS3-204ENST00000462236 KNG1P01042 644 aa6□□□□□ -1.45
COPS3-204ENST00000462236 PLA2G1BP04054 148 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms