RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SPATA31C1P0DKV0 1188 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 NAMPTP43490 491 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 ROR1Q01973 937 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 PPP2R5DQ14738 602 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 TMEM132AQ24JP5 1023 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 PRSS36Q5K4E3 855 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 EEF1DP3Q658K8 133 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 LAIR1Q6GTX8 287 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 SLC8B1Q6J4K2 584 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 CELF5Q8N6W0 485 aaKnown RBP11.95□□□□□ -0.5
CBX3-205ENST00000462165 C3orf58Q8NDZ4 430 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 BSNDQ8WZ55 320 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 WASF1Q92558 559 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 BRD9Q9H8M2 597 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 ZFP14Q9HCL3 533 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 TUFT1Q9NNX1 390 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 TRPV5Q9NQA5 729 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 ORC3Q9UBD5 711 aaPredicted RBP11.95□□□□□ -0.5
CBX3-205ENST00000462165 NDRG2Q9UN36 371 aaKnown RBP11.95□□□□□ -0.5
CBX3-205ENST00000462165 GDAQ9Y2T3 454 aa11.95□□□□□ -0.5
CBX3-205ENST00000462165 LAMA1P25391 3075 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 WDR27A2RRH5 827 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 WNT7AO00755 349 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 ZNF197O14709 1029 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 DTNBO60941 627 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 LRP3O75074 770 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 CTDNEP1O95476 244 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 ATF2P15336 505 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 ELF1P32519 619 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 BRCC3P46736 316 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 CCR3P51677 355 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 SPEM2Q0P670 501 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 GLRA4Q5JXX5 417 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 CATSPER3Q86XQ3 398 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 MAP4K3Q8IVH8 894 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 IRF7Q92985 503 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 TCEAL4Q96EI5 215 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 ASB16Q96NS5 453 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 NACC1Q96RE7 527 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 CORO1BQ9BR76 489 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 TRMT61BQ9BVS5 477 aaKnown RBP11.94□□□□□ -0.5
CBX3-205ENST00000462165 GOLGA2P5Q9HBQ8 144 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 ZNF334Q9HCZ1 680 aaPredicted RBP11.94□□□□□ -0.5
CBX3-205ENST00000462165 RAB23Q9ULC3 237 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 USP20Q9Y2K6 914 aa11.94□□□□□ -0.5
CBX3-205ENST00000462165 MAP1BP46821 2468 aaKnown RBP11.93□□□□□ -0.5
CBX3-205ENST00000462165 I3L4J1 428 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 NRG2O14511 850 aaPredicted RBP11.93□□□□□ -0.5
CBX3-205ENST00000462165 PRRG1O14668 218 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 SLC30A4O14863 429 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 MED24O75448 989 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 RETP07949 1114 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 FDPSP14324 419 aaKnown RBP11.93□□□□□ -0.5
CBX3-205ENST00000462165 CYP11B2P19099 503 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 GRM2Q14416 872 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 PPP2R5AQ15172 486 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 FAM78AQ5JUQ0 283 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 NT5DC1Q5TFE4 455 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 TCEAL8Q8IYN2 117 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 DEPTORQ8TB45 409 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 NETO1Q8TDF5 533 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 FAM3CQ92520 227 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 POLR3CQ9BUI4 534 aaPredicted RBP11.93□□□□□ -0.5
CBX3-205ENST00000462165 TMEM60Q9H2L4 133 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 LMAN1LQ9HAT1 526 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 TPCN1Q9ULQ1 816 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 INSL5Q9Y5Q6 135 aa11.93□□□□□ -0.5
CBX3-205ENST00000462165 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.93□□□□□ -0.5
CBX3-205ENST00000462165 SMIM28A0A1B0GU29 152 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 BTBD18B2RXH4 712 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 SYN3O14994 580 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 PSMC3P17980 439 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 LIG1P18858 919 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 GDI1P31150 447 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 CCR2P41597 374 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 EFNA5P52803 228 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 MLLT6P55198 1093 aaPredicted RBP11.92□□□□□ -0.5
CBX3-205ENST00000462165 SOX4Q06945 474 aaPredicted RBP11.92□□□□□ -0.5
CBX3-205ENST00000462165 MRPL58Q14197 206 aaKnown RBP11.92□□□□□ -0.5
CBX3-205ENST00000462165 LPAL2Q16609 132 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 XKR4Q5GH76 650 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 ATF7IP2Q5U623 682 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 TPGS2Q68CL5 300 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 PADI6Q6TGC4 694 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 VITQ6UXI7 678 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 ALKAL1Q6UXT8 129 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 PDZD4Q76G19 769 aaPredicted RBP11.92□□□□□ -0.5
CBX3-205ENST00000462165 APBB1IPQ7Z5R6 666 aaPredicted RBP11.92□□□□□ -0.5
CBX3-205ENST00000462165 DEPDC1BQ8WUY9 529 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 SMARCD2Q92925 531 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 PIAS3Q9Y6X2 628 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 GREB1Q4ZG55 1949 aa11.92□□□□□ -0.5
CBX3-205ENST00000462165 ARHGEF35A5YM69 484 aa11.91□□□□□ -0.5
CBX3-205ENST00000462165 H7C4K7 107 aa11.91□□□□□ -0.5
CBX3-205ENST00000462165 PODXLO00592 558 aa11.91□□□□□ -0.5
CBX3-205ENST00000462165 MOSPD3O75425 235 aa11.91□□□□□ -0.5
CBX3-205ENST00000462165 SEC24AO95486 1093 aa11.91□□□□□ -0.5
CBX3-205ENST00000462165 CHRNB1P11230 501 aa11.91□□□□□ -0.5
CBX3-205ENST00000462165 RPA1P27694 616 aa11.91□□□□□ -0.5
CBX3-205ENST00000462165 GRM5P41594 1212 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms