RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 LRRIQ3A6PVS8 624 aaPredicted RBP16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 NPTXRO95502 500 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 RB1P06400 928 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 LINC00271P0C7V0 271 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 GCLMP48507 274 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 MCCD1P59942 119 aaPredicted RBP16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 OSTNP61366 133 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 DLG4P78352 724 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 AAK1Q2M2I8 961 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 SEZ6Q53EL9 994 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 KRT39Q6A163 491 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 CRELD2Q6UXH1 353 aaPredicted RBP16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 CACNA2D4Q7Z3S7 1137 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 NPAS4Q8IUM7 802 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 MICALL1Q8N3F8 863 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 FIBCD1Q8N539 461 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 GDPD5Q8WTR4 605 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 TMEM40Q8WWA1 233 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 FAM212AQ96EL1 285 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 CRACR2AQ9BSW2 395 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 EDEM3Q9BZQ6 932 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 TMEM8AQ9HCN3 771 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 FAM207AQ9NSI2 230 aaPredicted RBP16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 GCNT4Q9P109 453 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 SIK3Q9Y2K2 1263 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 NOC2LQ9Y3T9 749 aaKnown RBP16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 RWDD3Q9Y3V2 267 aa16.41■□□□□ 0.22
TMEM39A-203ENST00000461654 PRUNE2Q8WUY3 3088 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 A0A1W2PQJ5 194 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 PMM2O15305 246 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 STAG3L1P0CL83 205 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 ZSCAN20P17040 1043 aaPredicted RBP16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 HOXA11P31270 313 aaPredicted RBP16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 CASP14P31944 242 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 GRM5P41594 1212 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 YARSP54577 528 aaKnown RBP16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 NFX1Q12986 1120 aaKnown RBP16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 ZBTB41Q5SVQ8 909 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 FAM228AQ86W67 206 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 HACE1Q8IYU2 909 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 CLP1Q92989 425 aaKnown RBP16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 MRPL38Q96DV4 380 aaKnown RBP16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 ACAP3Q96P50 834 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 CGRRF1Q99675 332 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 PDE11AQ9HCR9 933 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 PLCB1Q9NQ66 1216 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 CHST12Q9NRB3 414 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 RGS18Q9NS28 235 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 RNF216Q9NWF9 866 aaPredicted RBP16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 CAPN11Q9UMQ6 739 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 TTC3P53804 2025 aa16.4■□□□□ 0.22
TMEM39A-203ENST00000461654 FAM189A1O60320 539 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 MFAP3LO75121 409 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 GYPCP04921 128 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 BMPR1AP36894 532 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 TNFSF9P41273 254 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 KLK7P49862 253 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 CLDN10P78369 228 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 PPP3CAQ08209 521 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 KCNMA1Q12791 1236 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 BIRC3Q13489 604 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 GPM6BQ13491 265 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 PTPROQ16827 1216 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 CBWD6Q4V339 395 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 CBWD3Q5JTY5 395 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 CBWD5Q5RIA9 395 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 TWF2Q6IBS0 349 aaKnown RBP16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 WDR49Q8IV35 697 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 CD302Q8IX05 232 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 CMTR2Q8IYT2 770 aaKnown RBP16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 CCDC112Q8NEF3 446 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 PLEKHO2Q8TD55 490 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 HLA-CQ95604 372 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 TMEM117Q9H0C3 514 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 C1orf112Q9NSG2 853 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 ZNHIT6Q9NWK9 470 aaKnown RBP16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 ST3GAL5Q9UNP4 418 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 DAAM1Q9Y4D1 1078 aa16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 PRRC2BQ5JSZ5 2229 aaKnown RBP16.39■□□□□ 0.21
TMEM39A-203ENST00000461654 COL4A4P53420 1690 aaPredicted RBP16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 TTC26A0AVF1 554 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 PHACTR2O75167 634 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 BMP1P13497 986 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 SLC9A1P19634 815 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 PON1P27169 355 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 KRT9P35527 623 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 ADKP55263 362 aaKnown RBP16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 FAM189BP81408 668 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 ZBED6P86452 979 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 BTG3Q14201 252 aaPredicted RBP16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 SKIV2LQ15477 1246 aaKnown RBP16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 ENOX2Q16206 610 aaKnown RBP16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 C1orf220Q5T0J3 134 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 SLC24A5Q71RS6 500 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 LRRC8AQ8IWT6 810 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 EHBP1Q8NDI1 1231 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 FBXL13Q8NEE6 735 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 CACTINQ8WUQ7 758 aaKnown RBP16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 PANX2Q96RD6 677 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms