RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 TRPV4Q9HBA0 871 aa16■□□□□ 0.15
DNMT3A-207ENST00000461228 NCDNQ9UBB6 729 aa16■□□□□ 0.15
DNMT3A-207ENST00000461228 ZFHX4Q86UP3 3567 aa16■□□□□ 0.15
DNMT3A-207ENST00000461228 FAM170BA6NMN3 283 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 ZNF197O14709 1029 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 PAPSS2O95340 614 aaPredicted RBP15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 LRG1P02750 347 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 MYBP10242 640 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 KCNE1P15382 129 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 FXR2P51116 673 aaKnown RBP eCLIP15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 CLCNKBP51801 687 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 NRLP54845 237 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 SLC5A9Q2M3M2 681 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 ALKAL1Q6UXT8 129 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 NOSTRINQ8IVI9 506 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 C3orf58Q8NDZ4 430 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 RABGGTAQ92696 567 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 KCNN1Q92952 543 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 KXD1Q9BQD3 176 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 TMEM60Q9H2L4 133 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 PTPRHQ9HD43 1115 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 HCFC1R1Q9NWW0 138 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 CNTN3Q9P232 1028 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 ARHGAP28Q9P2N2 729 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 POLIQ9UNA4 740 aa15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 MAP1BP46821 2468 aaKnown RBP15.99■□□□□ 0.15
DNMT3A-207ENST00000461228 USP24Q9UPU5 2620 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 GREB1Q4ZG55 1949 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 SPAG17Q6Q759 2223 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 WDR27A2RRH5 827 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 SHISA7A6NL88 538 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 H7C4K7 107 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 FOXD2O60548 495 aaPredicted RBP15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 LRRN2O75325 713 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 PROZP22891 400 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 TKTP29401 623 aaKnown RBP15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 RPL9P32969 192 aaKnown RBP15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 YARSP54577 528 aaKnown RBP15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 FZD5Q13467 585 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 MRPL58Q14197 206 aaKnown RBP15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 ME3Q16798 604 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 TMEM132AQ24JP5 1023 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 EEF1DP3Q658K8 133 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 KCTD17Q8N5Z5 321 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 IRF7Q92985 503 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 ASB16Q96NS5 453 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 CCDC94Q9BW85 323 aaPredicted RBP15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 FOXP1Q9H334 677 aaPredicted RBP15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 TMEM134Q9H6X4 195 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 INSL5Q9Y5Q6 135 aa15.98■□□□□ 0.15
DNMT3A-207ENST00000461228 SMIM28A0A1B0GU29 152 aa15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 MCF2P10911 925 aa15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 PTPN2P17706 415 aa15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 SAFBQ15424 915 aaKnown RBP eCLIP15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 MAP4K3Q8IVH8 894 aa15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 BEST2Q8NFU1 509 aa15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 E2F7Q96AV8 911 aa15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 RTKNQ9BST9 563 aa15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 TIPINQ9BVW5 301 aa15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 CDT1Q9H211 546 aa15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 MTF2Q9Y483 593 aaPredicted RBP15.97■□□□□ 0.15
DNMT3A-207ENST00000461228 ABLIM1O14639 778 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 CEBPBP17676 345 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 MCM7P33993 719 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 CCR3P51677 355 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 CSTF1Q05048 431 aaKnown RBP15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 RSPO4Q2I0M5 234 aaPredicted RBP15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 ZNF568Q3ZCX4 644 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 GLRA4Q5JXX5 417 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 NT5DC1Q5TFE4 455 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 LAIR1Q6GTX8 287 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 ZNF280DQ6N043 979 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 SMARCD2Q92925 531 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 SUSD3Q96L08 255 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 DRC1Q96MC2 740 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 MRPL4Q9BYD3 311 aaKnown RBP15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 RAB34Q9BZG1 259 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 GPR88Q9GZN0 384 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 CXCL16Q9H2A7 254 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 ZFP14Q9HCL3 533 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 AFF4Q9UHB7 1163 aaKnown RBP15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 GMEB2Q9UKD1 530 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 GDAQ9Y2T3 454 aa15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 RBM19Q9Y4C8 960 aaKnown RBP15.96■□□□□ 0.15
DNMT3A-207ENST00000461228 ARNTLO00327 626 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 LAD1O00515 517 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 PODXLO00592 558 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 PRRG1O14668 218 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 LARGE1O95461 756 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 PSMC3P17980 439 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 SCP2P22307 547 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 TGM1P22735 817 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 ELF1P32519 619 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 SOX4Q06945 474 aaPredicted RBP15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 MTAPQ13126 283 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 DMP1Q13316 513 aaPredicted RBP15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 PDIA5Q14554 519 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 PDZD4Q76G19 769 aaPredicted RBP15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 MAEAQ7L5Y9 396 aa15.95■□□□□ 0.14
DNMT3A-207ENST00000461228 ELMOD1Q8N336 334 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms