RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 PDXKO00764 312 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 PER2O15055 1255 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 IL18RAPO95256 599 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 SMC2O95347 1197 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 GUCY2FP51841 1108 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 DSG1Q02413 1049 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 ADAM15Q13444 863 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 KCNC3Q14003 757 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 EFCAB13Q8IY85 973 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 SMARCE1Q969G3 411 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 PPP2R3CQ969Q6 453 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 PABPC5Q96DU9 382 aaKnown RBP22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 B3GALT6Q96L58 329 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 DMAC2Q9NW81 257 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 RMND1Q9NWS8 449 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 RBAKQ9NYW8 714 aaPredicted RBP22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 MAPK8IP1Q9UQF2 711 aa22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.37■■□□□ 1.17
RPUSD3-210ENST00000460909 SF3B1O75533 1304 aaKnown RBP eCLIP22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 LINC01565O15544 149 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 NCK2O43639 380 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 LTBRP36941 435 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 TMEM132DQ14C87 1099 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 USP41Q3LFD5 358 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 GPR65Q8IYL9 337 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 SMYD4Q8IYR2 804 aaPredicted RBP22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 EFHBQ8N7U6 833 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 GOLGA5Q8TBA6 731 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 HLA-CQ95604 372 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 IGFLR1Q9H665 355 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 KIAA1586Q9HCI6 787 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 COG5Q9UP83 839 aa22.36■■□□□ 1.17
RPUSD3-210ENST00000460909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 ZNF233A6NK53 670 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 XPOTO43592 962 aaKnown RBP22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 GLP2RO95838 553 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 BRCC3P46736 316 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 GLUD2P49448 558 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 CYP2J2P51589 502 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 BMS1Q14692 1282 aaKnown RBP22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 SNRNP35Q16560 246 aaKnown RBP22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 COBLL1Q53SF7 1204 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 RTP2Q5QGT7 225 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 ZNF658Q5TYW1 1059 aaPredicted RBP22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 NT5DC4Q86YG4 428 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 SLC9A9Q8IVB4 645 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 XXYLT1Q8NBI6 393 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 VN1R2Q8NFZ6 395 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 CDCA3Q99618 268 aaPredicted RBP22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 UBE2ZQ9H832 354 aaPredicted RBP22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 PDE11AQ9HCR9 933 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 MRPL17Q9NRX2 175 aaKnown RBP22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 TRAF3IP3Q9Y228 551 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 A0A0C4DFX4 3053 aa22.35■■□□□ 1.17
RPUSD3-210ENST00000460909 ANO9A1A5B4 782 aa22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 KIF20AO95235 890 aa22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 URODP06132 367 aa22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 CNPP09543 421 aaKnown RBP22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 RBM10P98175 930 aaKnown RBP22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 DLX2Q07687 328 aaPredicted RBP22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 ELAVL2Q12926 359 aaKnown RBP22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 FAM171A1Q5VUB5 890 aa22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 BEST2Q8NFU1 509 aa22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 NOC3LQ8WTT2 800 aaKnown RBP22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 GBP4Q96PP9 640 aa22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 RXFP1Q9HBX9 757 aa22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 THEGQ9P2T0 379 aa22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 MAN1B1Q9UKM7 699 aa22.34■■□□□ 1.17
RPUSD3-210ENST00000460909 I3L4J1 428 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 PIRO00625 290 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 C2CD2LO14523 706 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 PPEF2O14830 753 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 CLASP2O75122 1294 aaKnown RBP22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 TBX10O75333 385 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 FGFR3P22607 806 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 PRCPP42785 496 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 TFF2Q03403 129 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 ZCWPW2Q504Y3 356 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 C9orf57Q5W0N0 161 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 TMEM184AQ6ZMB5 413 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 RDH13Q8NBN7 331 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 KLHL5Q96PQ7 755 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 GZF1Q9H116 711 aaPredicted RBP22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 DPP3Q9NY33 737 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 CLDND1Q9NY35 253 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 SSX2IPQ9Y2D8 614 aa22.33■■□□□ 1.17
RPUSD3-210ENST00000460909 PTPRJQ12913 1337 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 SCN1AP35498 2009 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 TRAPPC3O43617 180 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 BMP6P22004 513 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 CA8P35219 290 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 AARSP49588 968 aaKnown RBP eCLIP22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 MYBPC2Q14324 1141 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 NFIL3Q16649 462 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 KIAA1841Q6NSI8 718 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 CXorf38Q8TB03 319 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 LNX1Q8TBB1 728 aaPredicted RBP22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 RIN2Q8WYP3 895 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms