RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 IGSF21Q96ID5 467 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 MFSD14AQ96MC6 490 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 LMAN2LQ9H0V9 348 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 PUF60Q9UHX1 559 aaKnown RBP24.35■■□□□ 1.49
C9orf3-209ENST00000460573 DACH1Q9UI36 760 aa24.35■■□□□ 1.49
C9orf3-209ENST00000460573 CETN3O15182 167 aa24.34■■□□□ 1.49
C9orf3-209ENST00000460573 KCNA5P22460 613 aa24.34■■□□□ 1.49
C9orf3-209ENST00000460573 PAK1Q13153 545 aa24.34■■□□□ 1.49
C9orf3-209ENST00000460573 CT47A1Q5JQC4 288 aaPredicted RBP24.34■■□□□ 1.49
C9orf3-209ENST00000460573 ANKRD40Q6AI12 368 aa24.34■■□□□ 1.49
C9orf3-209ENST00000460573 NELFBQ8WX92 580 aa24.34■■□□□ 1.49
C9orf3-209ENST00000460573 NECAB3Q96P71 396 aaPredicted RBP24.34■■□□□ 1.49
C9orf3-209ENST00000460573 NSUN3Q9H649 340 aaKnown RBP24.34■■□□□ 1.49
C9orf3-209ENST00000460573 TMEM63CQ9P1W3 806 aa24.34■■□□□ 1.49
C9orf3-209ENST00000460573 CASTOR2A6NHX0 329 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 NT5C1B-RDH14C9J2C7 533 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 ITGB1P05556 798 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 LRPAP1P30533 357 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 PBX3P40426 434 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 SOX4Q06945 474 aaPredicted RBP24.33■■□□□ 1.49
C9orf3-209ENST00000460573 CYP24A1Q07973 514 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 PSMD6Q15008 389 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 SPATA1Q5VX52 437 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 KLHL10Q6JEL2 608 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 DCLRE1AQ6PJP8 1040 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 SASS6Q6UVJ0 657 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 USP37Q86T82 979 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 SPPL3Q8TCT6 385 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 C18orf25Q96B23 403 aaPredicted RBP24.33■■□□□ 1.49
C9orf3-209ENST00000460573 MKNK1Q9BUB5 465 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 PDE11AQ9HCR9 933 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 VCANP13611 3396 aa24.33■■□□□ 1.49
C9orf3-209ENST00000460573 TRIP11Q15643 1979 aa24.33■■□□□ 1.48
C9orf3-209ENST00000460573 TMEM189-UBE2V1I3L0A0 370 aa24.32■■□□□ 1.48
C9orf3-209ENST00000460573 LETM1O95202 739 aaPredicted RBP24.32■■□□□ 1.48
C9orf3-209ENST00000460573 NFICP08651 508 aa24.32■■□□□ 1.48
C9orf3-209ENST00000460573 PSMC2P35998 433 aaKnown RBP24.32■■□□□ 1.48
C9orf3-209ENST00000460573 SPAG1Q07617 926 aa24.32■■□□□ 1.48
C9orf3-209ENST00000460573 UPP1Q16831 310 aa24.32■■□□□ 1.48
C9orf3-209ENST00000460573 CEP135Q66GS9 1140 aa24.32■■□□□ 1.48
C9orf3-209ENST00000460573 CAVIN1Q6NZI2 390 aaKnown RBP24.32■■□□□ 1.48
C9orf3-209ENST00000460573 ZC3H3Q8IXZ2 948 aaKnown RBP24.32■■□□□ 1.48
C9orf3-209ENST00000460573 PPP2R3CQ969Q6 453 aa24.32■■□□□ 1.48
C9orf3-209ENST00000460573 FNBP1Q96RU3 617 aa24.32■■□□□ 1.48
C9orf3-209ENST00000460573 PRG3Q9Y2Y8 225 aaPredicted RBP24.32■■□□□ 1.48
C9orf3-209ENST00000460573 CLCNKBP51801 687 aa24.31■■□□□ 1.48
C9orf3-209ENST00000460573 PMS1P54277 932 aaKnown RBP24.31■■□□□ 1.48
C9orf3-209ENST00000460573 ENPEPQ07075 957 aa24.31■■□□□ 1.48
C9orf3-209ENST00000460573 PDCD11Q14690 1871 aaKnown RBP24.31■■□□□ 1.48
C9orf3-209ENST00000460573 TCEAL5Q5H9L2 206 aa24.31■■□□□ 1.48
C9orf3-209ENST00000460573 DDX53Q86TM3 631 aaKnown RBP24.31■■□□□ 1.48
C9orf3-209ENST00000460573 WDR49Q8IV35 697 aa24.31■■□□□ 1.48
C9orf3-209ENST00000460573 TTC28Q96AY4 2481 aa24.31■■□□□ 1.48
C9orf3-209ENST00000460573 GOLGA2P5Q9HBQ8 144 aa24.31■■□□□ 1.48
C9orf3-209ENST00000460573 ALG13Q9NP73 1137 aaKnown RBP24.31■■□□□ 1.48
C9orf3-209ENST00000460573 TUBGCP4Q9UGJ1 667 aa24.31■■□□□ 1.48
C9orf3-209ENST00000460573 RWDD2AQ9UIY3 292 aa24.31■■□□□ 1.48
C9orf3-209ENST00000460573 ADAM28Q9UKQ2 775 aa24.31■■□□□ 1.48
C9orf3-209ENST00000460573 CTNND2Q9UQB3 1225 aa24.31■■□□□ 1.48
C9orf3-209ENST00000460573 TRIM49BA6NDI0 452 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 PODXLO00592 558 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 SLC16A3O15427 465 aaKnown RBP24.3■■□□□ 1.48
C9orf3-209ENST00000460573 TADA2AO75478 443 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 PAX3P23760 479 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 CASP4P49662 377 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 TTI2Q6NXR4 508 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 INTS8Q75QN2 995 aaKnown RBP24.3■■□□□ 1.48
C9orf3-209ENST00000460573 EFCAB13Q8IY85 973 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 TMC2Q8TDI7 906 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 POF1BQ8WVV4 589 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 ANKRD36BP1Q96IX9 119 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 CEP63Q96MT8 703 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 CGRRF1Q99675 332 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 PAAF1Q9BRP4 392 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 MARCH5Q9NX47 278 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 ANK1P16157 1881 aa24.3■■□□□ 1.48
C9orf3-209ENST00000460573 GRM6O15303 877 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 AKAP3O75969 853 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 B3GAT3O94766 335 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 TMEM191BP0C7N4 346 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 EPB41P11171 864 aaKnown RBP24.29■■□□□ 1.48
C9orf3-209ENST00000460573 ERCC5P28715 1186 aaPredicted RBP24.29■■□□□ 1.48
C9orf3-209ENST00000460573 AP3M2P53677 418 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 WNT7BP56706 349 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 TFAMQ00059 246 aaKnown RBP24.29■■□□□ 1.48
C9orf3-209ENST00000460573 ELAVL2Q12926 359 aaKnown RBP24.29■■□□□ 1.48
C9orf3-209ENST00000460573 BMS1Q14692 1282 aaKnown RBP24.29■■□□□ 1.48
C9orf3-209ENST00000460573 DUOXA2Q1HG44 320 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 DPCR1Q3MIW9 517 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 PDE12Q6L8Q7 609 aaKnown RBP24.29■■□□□ 1.48
C9orf3-209ENST00000460573 TMEM173Q86WV6 379 aaPredicted RBP24.29■■□□□ 1.48
C9orf3-209ENST00000460573 FAM186BQ8IYM0 893 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 PARD3BQ8TEW8 1205 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 INTS13Q9NVM9 706 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 DPP3Q9NY33 737 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 CLDND1Q9NY35 253 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 FAM50BQ9Y247 325 aa24.29■■□□□ 1.48
C9orf3-209ENST00000460573 TULP1O00294 542 aaPredicted RBP24.28■■□□□ 1.48
C9orf3-209ENST00000460573 TRAPPC3O43617 180 aa24.28■■□□□ 1.48
C9orf3-209ENST00000460573 NCK2O43639 380 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms