RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 MYBBP1AQ9BQG0 1328 aaKnown RBP4.36□□□□□ -1.71
RFC4-211ENST00000460408 UBE2QL1A1L167 161 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 FOXN1O15353 648 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 GPR32O75388 356 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 STC2O76061 302 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 ZBED1O96006 694 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 FTLP02792 175 aaPredicted RBP4.35□□□□□ -1.71
RFC4-211ENST00000460408 TRIM27P14373 513 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 DDCP20711 480 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 HTR1BP28222 390 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 ALDH1A3P47895 512 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 FLT3LGP49771 235 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 NKX6-1P78426 367 aaPredicted RBP4.35□□□□□ -1.71
RFC4-211ENST00000460408 FAM47AQ5JRC9 791 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 THEMIS2Q5TEJ8 643 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 SPTY2D1Q68D10 685 aaPredicted RBP4.35□□□□□ -1.71
RFC4-211ENST00000460408 SWSAP1Q6NVH7 229 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 SRGAP1Q7Z6B7 1085 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 FBXO18Q8NFZ0 1043 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 OR5M3Q8NGP4 307 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 IL17RAQ96F46 866 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 TMX3Q96JJ7 454 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 CDC5LQ99459 802 aaKnown RBP4.35□□□□□ -1.71
RFC4-211ENST00000460408 B3GNT5Q9BYG0 378 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 SENP6Q9GZR1 1112 aaPredicted RBP4.35□□□□□ -1.71
RFC4-211ENST00000460408 KMT5AQ9NQR1 393 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 SLC2A4RGQ9NR83 387 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 CALCOCO1Q9P1Z2 691 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 HECAQ9UBI9 543 aaPredicted RBP4.35□□□□□ -1.71
RFC4-211ENST00000460408 L1RE1Q9UN81 338 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 STXBP5LQ9Y2K9 1186 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 REXO2Q9Y3B8 237 aaKnown RBP4.35□□□□□ -1.71
RFC4-211ENST00000460408 NR2E3Q9Y5X4 410 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 ACTL7AQ9Y615 435 aa4.35□□□□□ -1.71
RFC4-211ENST00000460408 A0A088AWK7 358 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 NT5C1B-RDH14C9J2C7 533 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 CYP27B1O15528 508 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 MAP4K4O95819 1239 aaPredicted RBP4.34□□□□□ -1.71
RFC4-211ENST00000460408 KRT18P05783 430 aaKnown RBP4.34□□□□□ -1.71
RFC4-211ENST00000460408 IL2RBP14784 551 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 RHCEP18577 417 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 MALP21145 153 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 FBLP22087 321 aaKnown RBP4.34□□□□□ -1.71
RFC4-211ENST00000460408 PTPN7P35236 360 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 NPEPPSP55786 919 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 ZNF280AP59817 542 aaPredicted RBP4.34□□□□□ -1.71
RFC4-211ENST00000460408 CTXN1P60606 82 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 RHDQ02161 417 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 APBA1Q02410 837 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 SNAPC2Q13487 334 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 ANO6Q4KMQ2 910 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 KHDC1Q4VXA5 237 aaKnown RBP4.34□□□□□ -1.71
RFC4-211ENST00000460408 DACT2Q5SW24 774 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 AFMIDQ63HM1 303 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 OTUD7BQ6GQQ9 843 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 SLC4A10Q6U841 1118 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 NPNTQ6UXI9 565 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 PDZD4Q76G19 769 aaPredicted RBP4.34□□□□□ -1.71
RFC4-211ENST00000460408 RSPH3Q86UC2 560 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 PLXDC1Q8IUK5 500 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 D2HGDHQ8N465 521 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 C3orf20Q8ND61 904 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 SLC35B2Q8TB61 432 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 KLHDC4Q8TBB5 520 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 STON2Q8WXE9 905 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 SLC39A13Q96H72 371 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 VRK1Q99986 396 aaPredicted RBP4.34□□□□□ -1.71
RFC4-211ENST00000460408 TCF25Q9BQ70 676 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 FAM204AQ9H8W3 233 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 MAN1C1Q9NR34 630 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 TMEM140Q9NV12 185 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 MOCS1Q9NZB8 636 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 NCDNQ9UBB6 729 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 SLC23A1Q9UHI7 598 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 POLHQ9Y253 713 aa4.34□□□□□ -1.71
RFC4-211ENST00000460408 A0A1W2PRX2 142 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 CAPN14A8MX76 684 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 HOXA3O43365 443 aaPredicted RBP4.33□□□□□ -1.72
RFC4-211ENST00000460408 MYL1P05976 194 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 TYRP14679 529 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 RAB1AP62820 205 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 RRP1BQ14684 758 aaKnown RBP4.33□□□□□ -1.72
RFC4-211ENST00000460408 CSRP2Q16527 193 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 FAM214AQ32MH5 1076 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 FAM111BQ6SJ93 734 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 GPRIN1Q7Z2K8 1008 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 HEATR3Q7Z4Q2 680 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 COL23A1Q86Y22 540 aaPredicted RBP4.33□□□□□ -1.72
RFC4-211ENST00000460408 FAM156AQ8NDB6 213 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 PJA1Q8NG27 643 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 TTC17Q96AE7 1141 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 CDK5RAP3Q96JB5 506 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 ZNF512Q96ME7 567 aaPredicted RBP4.33□□□□□ -1.72
RFC4-211ENST00000460408 MPHOSPH9Q99550 1183 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 TTPALQ9BTX7 342 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 LSM14BQ9BX40 385 aaKnown RBP4.33□□□□□ -1.72
RFC4-211ENST00000460408 CHST12Q9NRB3 414 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 PCDHA3Q9Y5H8 950 aa4.33□□□□□ -1.72
RFC4-211ENST00000460408 PNPLA7Q6ZV29 1317 aa4.32□□□□□ -1.72
RFC4-211ENST00000460408 TMEM191CA6NGB0 347 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms