RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CAP2P40123 477 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 CDR2Q01850 454 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 ANKRD20A4Q4UJ75 823 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 ANKRD20A8PQ5CZ79 823 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 ANKRD20A2Q5SQ80 823 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 ANKRD20A1Q5TYW2 823 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 ZNF571Q7Z3V5 609 aaPredicted RBP15.59■□□□□ 0.09
PTPRU-205ENST00000460170 TARS2Q9BW92 718 aaKnown RBP15.59■□□□□ 0.09
PTPRU-205ENST00000460170 MAPK7Q13164 816 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 ZNF720Q7Z2F6 126 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 SDCCAG3Q96C92 435 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 SGSM3Q96HU1 749 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 SMARCAD1Q9H4L7 1026 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 MYOZ2Q9NPC6 264 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 ANGPTL3Q9Y5C1 460 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 FAM107AO95990 144 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 KITP10721 976 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 SHMT1P34896 483 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 ACAD10Q6JQN1 1059 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 SLC4A9Q96Q91 983 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 COPS2P61201 443 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 RBP5P82980 135 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 STILQ15468 1287 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 FSCBQ5H9T9 825 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 FASTKD5Q7L8L6 764 aaKnown RBP15.58■□□□□ 0.09
PTPRU-205ENST00000460170 AGBL3Q8NEM8 1001 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 SKA2Q8WVK7 121 aaPredicted RBP15.58■□□□□ 0.09
PTPRU-205ENST00000460170 SEC16BQ96JE7 1060 aa15.58■□□□□ 0.09
PTPRU-205ENST00000460170 SCAF8Q9UPN6 1271 aaKnown RBP15.58■□□□□ 0.09
PTPRU-205ENST00000460170 PMLP29590 882 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 FNTAP49354 379 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 CENPCQ03188 943 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 AP1B1Q10567 949 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 ZNF560Q96MR9 790 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 OLFML3Q9NRN5 406 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 LRFN2Q9ULH4 789 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 TMX2Q9Y320 296 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 USP15Q9Y4E8 981 aaPredicted RBP15.58■□□□□ 0.08
PTPRU-205ENST00000460170 ZWINTO95229 277 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 BMP6P22004 513 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 ITGA8P53708 1063 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 PTGISQ16647 500 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 CBWD2Q8IUF1 395 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 THEM5Q8N1Q8 247 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 ACTRT1Q8TDG2 376 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 CYFIP2Q96F07 1278 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 CBWD1Q9BRT8 395 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 BAG5Q9UL15 447 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 RIC1Q4ADV7 1423 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 CCDC195A0A1B0GUA6 201 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 GTPBP10A4D1E9 387 aaKnown RBP15.58■□□□□ 0.08
PTPRU-205ENST00000460170 H3BRJ5 948 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 EZH2Q15910 746 aaKnown RBP15.58■□□□□ 0.08
PTPRU-205ENST00000460170 MYLK4Q86YV6 388 aaPredicted RBP15.58■□□□□ 0.08
PTPRU-205ENST00000460170 RYBPQ8N488 228 aaPredicted RBP15.58■□□□□ 0.08
PTPRU-205ENST00000460170 FAM118BQ9BPY3 351 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 GPRC5CQ9NQ84 441 aa15.58■□□□□ 0.08
PTPRU-205ENST00000460170 FNDC3AQ9Y2H6 1198 aaKnown RBP15.58■□□□□ 0.08
PTPRU-205ENST00000460170 CFAP69A5D8W1 941 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 F5H423 210 aaPredicted RBP15.57■□□□□ 0.08
PTPRU-205ENST00000460170 PSMC6P62333 389 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 MEI1Q5TIA1 1274 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 FEZF2Q8TBJ5 459 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 MTMR8Q96EF0 704 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 FAM163AQ96GL9 167 aaPredicted RBP15.57■□□□□ 0.08
PTPRU-205ENST00000460170 NIF3L1Q9GZT8 377 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 DEFB129Q9H1M3 183 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 RAB21Q9UL25 225 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 TAC1P20366 129 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 MAGEA4P43358 317 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 HIPK4Q8NE63 616 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 PABPC3Q9H361 631 aaKnown RBP15.57■□□□□ 0.08
PTPRU-205ENST00000460170 BLOC1S4Q9NUP1 217 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 FAM47DPA6NHR8 397 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 F8VZ95 297 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 KCNN4O15554 427 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 TMEM119Q4V9L6 283 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 TNIP3Q96KP6 325 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 FAM129AQ9BZQ8 928 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 PPCSQ9HAB8 311 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 A0A0A6YYK5 440 aaPredicted RBP15.57■□□□□ 0.08
PTPRU-205ENST00000460170 TMEM120BA0PK00 339 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 SGPL1O95470 568 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 ANGEL2Q5VTE6 544 aaKnown RBP15.57■□□□□ 0.08
PTPRU-205ENST00000460170 KIAA1841Q6NSI8 718 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 KDM7AQ6ZMT4 941 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.57■□□□□ 0.089e-7■■■■■ 49.7
PTPRU-205ENST00000460170 FSD1LQ9BXM9 530 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 ADAM33Q9BZ11 813 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 TRIM4Q9C037 500 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 AIPL1Q9NZN9 384 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 GGT7Q9UJ14 662 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 SNX9Q9Y5X1 595 aa15.57■□□□□ 0.08
PTPRU-205ENST00000460170 H3BQF6 201 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 GOLGA8RI6L899 631 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 TYK2P29597 1187 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 NME3Q13232 169 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 GRAMD1BQ3KR37 738 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 GPAT2Q6NUI2 795 aa15.56■□□□□ 0.08
PTPRU-205ENST00000460170 TRIM67Q6ZTA4 783 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 560.6 ms