RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CAND2O75155 1236 aa26.27■■□□□ 1.8
U2AF1-204ENST00000459639 CTSHP09668 335 aa26.27■■□□□ 1.8
U2AF1-204ENST00000459639 THPOP40225 353 aa26.27■■□□□ 1.8
U2AF1-204ENST00000459639 TMEM132DQ14C87 1099 aa26.27■■□□□ 1.8
U2AF1-204ENST00000459639 SGSM1Q2NKQ1 1148 aa26.27■■□□□ 1.8
U2AF1-204ENST00000459639 SPOPLQ6IQ16 392 aa26.27■■□□□ 1.8
U2AF1-204ENST00000459639 PAK6Q9NQU5 681 aaPredicted RBP26.27■■□□□ 1.8
U2AF1-204ENST00000459639 STARD7Q9NQZ5 370 aa26.27■■□□□ 1.8
U2AF1-204ENST00000459639 TRMT13Q9NUP7 481 aaKnown RBP26.27■■□□□ 1.8
U2AF1-204ENST00000459639 DERAQ9Y315 318 aa26.27■■□□□ 1.8
U2AF1-204ENST00000459639 KRT86O43790 486 aa26.26■■□□□ 1.79
U2AF1-204ENST00000459639 RPS6KA5O75582 802 aa26.26■■□□□ 1.79
U2AF1-204ENST00000459639 CST3P01034 146 aaPredicted RBP26.26■■□□□ 1.79
U2AF1-204ENST00000459639 YARSP54577 528 aaKnown RBP26.26■■□□□ 1.79
U2AF1-204ENST00000459639 CUL2Q13617 745 aa26.26■■□□□ 1.79
U2AF1-204ENST00000459639 TRIM71Q2Q1W2 868 aaKnown RBP26.26■■□□□ 1.79
U2AF1-204ENST00000459639 UBXN11Q5T124 520 aa26.26■■□□□ 1.79
U2AF1-204ENST00000459639 C10orf76Q5T2E6 689 aa26.26■■□□□ 1.79
U2AF1-204ENST00000459639 DHX38Q92620 1227 aaKnown RBP26.26■■□□□ 1.79
U2AF1-204ENST00000459639 TAF4BQ92750 862 aa26.26■■□□□ 1.79
U2AF1-204ENST00000459639 SNX27Q96L92 541 aa26.26■■□□□ 1.79
U2AF1-204ENST00000459639 SNTG2Q9NY99 539 aa26.26■■□□□ 1.79
U2AF1-204ENST00000459639 MAGEA1P43355 309 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 FAM26DQ5JW98 314 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 SMYD5Q6GMV2 418 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 ELMO3Q96BJ8 720 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 SEZ6LQ9BYH1 1024 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 NXF3Q9H4D5 531 aaKnown RBP26.25■■□□□ 1.79
U2AF1-204ENST00000459639 MYO1AQ9UBC5 1043 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 NENFQ9UMX5 172 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 NUB1Q9Y5A7 615 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 ATP8B3O60423 1300 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 KIF5CO60282 957 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 USP8P40818 1118 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 MYL6P60660 151 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 KIF5AQ12840 1032 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 CCDC122Q5T0U0 273 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 C1orf127Q8N9H9 656 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 CHST12Q9NRB3 414 aa26.25■■□□□ 1.79
U2AF1-204ENST00000459639 RCCD1A6NED2 376 aa26.24■■□□□ 1.79
U2AF1-204ENST00000459639 DNM1LO00429 736 aa26.24■■□□□ 1.79
U2AF1-204ENST00000459639 PJA2O43164 708 aa26.24■■□□□ 1.79
U2AF1-204ENST00000459639 SYT10Q6XYQ8 523 aa26.24■■□□□ 1.79
U2AF1-204ENST00000459639 KIF18AQ8NI77 898 aa26.24■■□□□ 1.79
U2AF1-204ENST00000459639 OLIG1Q8TAK6 271 aa26.24■■□□□ 1.79
U2AF1-204ENST00000459639 ARID3AQ99856 593 aa26.24■■□□□ 1.79
U2AF1-204ENST00000459639 NAGPAQ9UK23 515 aa26.24■■□□□ 1.79
U2AF1-204ENST00000459639 ST3GAL5Q9UNP4 418 aa26.24■■□□□ 1.79
U2AF1-204ENST00000459639 DDX3XO00571 662 aaKnown RBP eCLIP26.23■■□□□ 1.79
U2AF1-204ENST00000459639 GPR182O15218 404 aa26.23■■□□□ 1.79
U2AF1-204ENST00000459639 GNG11P61952 73 aa26.23■■□□□ 1.79
U2AF1-204ENST00000459639 ZNF699Q32M78 642 aa26.23■■□□□ 1.79
U2AF1-204ENST00000459639 TWF2Q6IBS0 349 aaKnown RBP26.23■■□□□ 1.79
U2AF1-204ENST00000459639 SLC30A5Q8TAD4 765 aa26.23■■□□□ 1.79
U2AF1-204ENST00000459639 NIF3L1Q9GZT8 377 aa26.23■■□□□ 1.79
U2AF1-204ENST00000459639 LACRTQ9GZZ8 138 aa26.23■■□□□ 1.79
U2AF1-204ENST00000459639 XYLT2Q9H1B5 865 aa26.23■■□□□ 1.79
U2AF1-204ENST00000459639 SIX4Q9UIU6 781 aa26.23■■□□□ 1.79
U2AF1-204ENST00000459639 ITGA11Q9UKX5 1188 aa26.23■■□□□ 1.79
U2AF1-204ENST00000459639 PCNTO95613 3336 aa26.23■■□□□ 1.79
U2AF1-204ENST00000459639 CYP26A1O43174 497 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 RECQL4O94761 1208 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 CLSTN1O94985 981 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 ABL1P00519 1130 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 NAB2Q15742 525 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 FBXO47Q5MNV8 452 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 SCARA3Q6AZY7 606 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 LNX1Q8TBB1 728 aaPredicted RBP26.22■■□□□ 1.79
U2AF1-204ENST00000459639 EPS8L1Q8TE68 723 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 ZNF592Q92610 1267 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 KIF12Q96FN5 646 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 FAXDC2Q96IV6 333 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 TSPAN18Q96SJ8 248 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 AGPAT1Q99943 283 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 CNTN3Q9P232 1028 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 TRIM10Q9UDY6 481 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 NOCTQ9UK39 431 aaKnown RBP26.22■■□□□ 1.79
U2AF1-204ENST00000459639 GUCA1BQ9UMX6 200 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 HES2Q9Y543 173 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 PAXBP1Q9Y5B6 917 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 UMODL1Q5DID0 1318 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 CENPFP49454 3210 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 ARVCFO00192 962 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 ACO1P21399 889 aaKnown RBP26.22■■□□□ 1.79
U2AF1-204ENST00000459639 C1QTNF8P60827 252 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 ALKBH5Q6P6C2 394 aaKnown RBP26.22■■□□□ 1.79
U2AF1-204ENST00000459639 ALKAL1Q6UXT8 129 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 CXorf38Q8TB03 319 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 DNAI1Q9UI46 699 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 TFR2Q9UP52 801 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 IPPQ9Y573 584 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 SQORQ9Y6N5 450 aa26.22■■□□□ 1.79
U2AF1-204ENST00000459639 KRT19P08727 400 aa26.21■■□□□ 1.79
U2AF1-204ENST00000459639 KRT5P13647 590 aa26.21■■□□□ 1.79
U2AF1-204ENST00000459639 TNFAIP3P21580 790 aa26.21■■□□□ 1.79
U2AF1-204ENST00000459639 ATICP31939 592 aa26.21■■□□□ 1.79
U2AF1-204ENST00000459639 PDE6CP51160 858 aa26.21■■□□□ 1.79
U2AF1-204ENST00000459639 GLYCTKQ8IVS8 523 aa26.21■■□□□ 1.79
U2AF1-204ENST00000459639 IRX2Q9BZI1 471 aaPredicted RBP26.21■■□□□ 1.79
U2AF1-204ENST00000459639 ERVK-5Q9HDB9 667 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms