RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 GPC3P51654 580 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 ACLYP53396 1101 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 CHMP4BP1P59074 171 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 PURAQ00577 322 aaKnown RBP9.66□□□□□ -0.86
VPS50-207ENST00000458530 PPIGQ13427 754 aaKnown RBP eCLIP9.66□□□□□ -0.86
VPS50-207ENST00000458530 RAPGEF1Q13905 1077 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 DCAF4L1Q3SXM0 396 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 TDRD12Q587J7 1177 aaKnown RBP9.66□□□□□ -0.86
VPS50-207ENST00000458530 E4F1Q66K89 784 aaPredicted RBP9.66□□□□□ -0.86
VPS50-207ENST00000458530 THSD4Q6ZMP0 1018 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 ENOSF1Q7L5Y1 443 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 BRSK2Q8IWQ3 736 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 EHBP1Q8NDI1 1231 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 FBXL13Q8NEE6 735 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 KCNV2Q8TDN2 545 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 HERVK_113Q902F9 699 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 BAP1Q92560 729 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 KAT2BQ92831 832 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 CCDC127Q96BQ5 260 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 PPP1R13BQ96KQ4 1090 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 CCDC42Q96M95 316 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 NECAB3Q96P71 396 aaPredicted RBP9.66□□□□□ -0.86
VPS50-207ENST00000458530 CGRRF1Q99675 332 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 LRFN3Q9BTN0 628 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 IMPG2Q9BZV3 1241 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 TSGA10Q9BZW7 698 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 NLRC4Q9NPP4 1024 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 C11orf16Q9NQ32 467 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 SETD4Q9NVD3 440 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 USP20Q9Y2K6 914 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 A0A087WZ62 844 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 LRRIQ3A6PVS8 624 aaPredicted RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 EIF3CLB5ME19 914 aaKnown RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 AKR1B10O60218 316 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 OFD1O75665 1012 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 GFPT2O94808 682 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 NOL4O94818 638 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 NDUFA10O95299 355 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 VTNP04004 478 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 DLATP10515 647 aaKnown RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 HARSP12081 509 aaKnown RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 CSF2RAP15509 400 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 TNNI1P19237 187 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 SLC9A1P19634 815 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 PROZP22891 400 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 AXLP30530 894 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 GCLMP48507 274 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 NLRP11P59045 1033 aaKnown RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 CLDN10P78369 228 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 BEX3Q00994 111 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 RAB30Q15771 203 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 CBWD6Q4V339 395 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 EPC2Q52LR7 807 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 ARHGAP29Q52LW3 1261 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 CBWD3Q5JTY5 395 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 CBWD5Q5RIA9 395 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 MARCH8Q5T0T0 291 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 PSRC1Q6PGN9 363 aaPredicted RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 KIAA1328Q86T90 577 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 WDR49Q8IV35 697 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 KIAA0319LQ8IZA0 1049 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 CCDC155Q8N6L0 562 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 PPM1EQ8WY54 764 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 LENG1Q96BZ8 264 aaPredicted RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 VWCEQ96DN2 955 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 NT5C1BQ96P26 610 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 EIF3CQ99613 913 aaKnown RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 FDXACB1Q9BRP7 624 aaPredicted RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 STK33Q9BYT3 514 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 TMEM117Q9H0C3 514 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 FAM49AQ9H0Q0 323 aaPredicted RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 NHEJ1Q9H9Q4 299 aaPredicted RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 CDHR5Q9HBB8 845 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 IFT122Q9HBG6 1241 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 C1orf112Q9NSG2 853 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 AIPL1Q9NZN9 384 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 YBX2Q9Y2T7 364 aaKnown RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 COQ4Q9Y3A0 265 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 ADGRG1Q9Y653 693 aa9.65□□□□□ -0.86
VPS50-207ENST00000458530 EPN1Q9Y6I3 576 aaPredicted RBP9.65□□□□□ -0.86
VPS50-207ENST00000458530 PRRC2BQ5JSZ5 2229 aaKnown RBP9.64□□□□□ -0.87
VPS50-207ENST00000458530 MROH7Q68CQ1 1323 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 EPHB6O15197 1021 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 GPR37L1O60883 481 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 PHACTR2O75167 634 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 CD4P01730 458 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 TNNC2P02585 160 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 HOXC8P31273 242 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 PIK3CAP42336 1068 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 ACOT2P49753 483 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 MFAP3P55082 362 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 PTPN11Q06124 597 aaPredicted RBP9.64□□□□□ -0.87
VPS50-207ENST00000458530 PPP3CAQ08209 521 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 KLHL30Q0D2K2 578 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 BIRC3Q13489 604 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 KCNA10Q16322 511 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 WDR44Q5JSH3 913 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 C10orf76Q5T2E6 689 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 WDR59Q6PJI9 974 aa9.64□□□□□ -0.87
VPS50-207ENST00000458530 RAD9BQ6WBX8 426 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms