RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 ANKLE1Q8NAG6 615 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 TAS1R2Q8TE23 839 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 ARMC5Q96C12 935 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 CPB2Q96IY4 423 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 ZNF668Q96K58 619 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 PPP1R16BQ96T49 567 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 EIF3CQ99613 913 aaKnown RBP9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 CRISPLD2Q9H0B8 497 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 RNF208Q9H0X6 261 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 DEF6Q9H4E7 631 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 NLRC4Q9NPP4 1024 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 TSKSQ9UJT2 592 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 DNAJC12Q9UKB3 198 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 ITGA11Q9UKX5 1188 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 PIN4Q9Y237 131 aaKnown RBP9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 EPN1Q9Y6I3 576 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 RALGAPA2Q2PPJ7 1873 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 SOWAHDA6NJG2 315 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 RBAK-RBAKDNI3L0D1 243 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 TLR3O15455 904 aaKnown RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 CSDE1O75534 798 aaKnown RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 LCA5LO95447 670 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 NPTXRO95502 500 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 STAU1O95793 577 aaKnown RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 ASS1P00966 412 aaKnown RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 HLA-DRAP01903 254 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 CHRNA1P02708 482 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 CXCL8P10145 99 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 P4HA1P13674 534 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 CTCFP49711 727 aaPredicted RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 CDK7P50613 346 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 PTPN5P54829 565 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 BPIFB4P59827 614 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 YWHAEP62258 255 aaKnown RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 GOLGA8FQ08AF8 430 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 GOLGA8DPQ0D2H9 430 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 TRPC3Q13507 836 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 BFSP2Q13515 415 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 DRAP1Q14919 205 aaPredicted RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 TMEM132DQ14C87 1099 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 SPA17Q15506 151 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 SGSM1Q2NKQ1 1148 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 TDRD12Q587J7 1177 aaKnown RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 FBXO47Q5MNV8 452 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 C1orf53Q5VUE5 145 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 E4F1Q66K89 784 aaPredicted RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 PHLDB3Q6NSJ2 640 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 TRAPPC11Q7Z392 1133 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 FAM228AQ86W67 206 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 TMEM40Q8WWA1 233 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 RSPH1Q8WYR4 309 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 SHC3Q92529 594 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 ZNF333Q96JL9 665 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 SNX27Q96L92 541 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 POP1Q99575 1024 aaKnown RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 TSGA10Q9BZW7 698 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 VRTNQ9H8Y1 702 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 NHEJ1Q9H9Q4 299 aaPredicted RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 CDHR5Q9HBB8 845 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 UBE2TQ9NPD8 197 aaPredicted RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 CNTN3Q9P232 1028 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 PPP2R2CQ9Y2T4 447 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 R3HCC1Q9Y3T6 440 aaKnown RBP9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 ADGRG1Q9Y653 693 aa9.6□□□□□ -0.87
CDC42EP3-204ENST00000457889 LACTBL1A8MY62 500 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 AKR1B10O60218 316 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 OFD1O75665 1012 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 HSPA8P11142 646 aaKnown RBP9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 KCNE1P15382 129 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 ZSCAN20P17040 1043 aaPredicted RBP9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 CLCN1P35523 988 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 KIF11P52732 1056 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 NOP14P78316 857 aaKnown RBP9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 TFAMQ00059 246 aaKnown RBP9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 PAK2Q13177 524 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 BMS1Q14692 1282 aaKnown RBP9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 SLC10A6Q3KNW5 377 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 XKR4Q5GH76 650 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 HGSNATQ68CP4 663 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 TWF2Q6IBS0 349 aaKnown RBP9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 PPP1R2P3Q6NXS1 205 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 RAD9BQ6WBX8 426 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 IRF2BP2Q7Z5L9 587 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 FAM71AQ8IYT1 594 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 PPM1KQ8N3J5 372 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 CEP120Q8N960 986 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 OR5B17Q8NGF7 314 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 HELQQ8TDG4 1101 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 SEMA4DQ92854 862 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 TOX2Q96NM4 488 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 DEFB118Q96PH6 123 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 FTHL17Q9BXU8 183 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 MTMR12Q9C0I1 747 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 NIF3L1Q9GZT8 377 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 HAUS4Q9H6D7 363 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 ERVK-5Q9HDB9 667 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 UBN1Q9NPG3 1134 aa9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 TRMT13Q9NUP7 481 aaKnown RBP9.59□□□□□ -0.87
CDC42EP3-204ENST00000457889 ARHGAP20Q9P2F6 1191 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms