RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 FNBP1Q96RU3 617 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 CGRRF1Q99675 332 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 BPIFA3Q9BQP9 254 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 PAAF1Q9BRP4 392 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 DNAJC25Q9H1X3 360 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 GOLGA2P5Q9HBQ8 144 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 METTL14Q9HCE5 456 aaKnown RBP12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 MARCH5Q9NX47 278 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 TUBGCP4Q9UGJ1 667 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 FAN1Q9Y2M0 1017 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 PCDHB12Q9Y5F1 795 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 CHD7Q9P2D1 2997 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 LRRIQ3A6PVS8 624 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 H3BNC9 293 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 PIRO00625 290 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 GNA14O95837 355 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 PPM1AP35813 382 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 CLCNKBP51801 687 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 VAMP7P51809 220 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 AP3M2P53677 418 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 DLG4P78352 724 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 DUOXA2Q1HG44 320 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 ANO6Q4KMQ2 910 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 SPOUT1Q5T280 376 aaKnown RBP12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 DCLRE1AQ6PJP8 1040 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 C15orf39Q6ZRI6 1047 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 USP37Q86T82 979 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 TMEM173Q86WV6 379 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 BEST2Q8NFU1 509 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 OR5B17Q8NGF7 314 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 CCDC127Q96BQ5 260 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 IGSF21Q96ID5 467 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 LRCH3Q96II8 777 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 POP1Q99575 1024 aaKnown RBP12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 COLEC11Q9BWP8 271 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 TTYH1Q9H313 450 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 THAP9Q9H5L6 903 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 DPP3Q9NY33 737 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 SPG21Q9NZD8 308 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 CACNG4Q9UBN1 327 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 TSC2P49815 1807 aa12.73□□□□□ -0.37
TRAPPC12-212ENST00000457845 CASTOR2A6NHX0 329 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 NT5C1B-RDH14C9J2C7 533 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 C4BPAP04003 597 aaKnown RBP12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 DLATP10515 647 aaKnown RBP12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 KRT13P13646 458 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 TNNI1P19237 187 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 IGFBP6P24592 240 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 CTNNB1P35222 781 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 PBX3P40426 434 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 OR1G1P47890 313 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 GUCY2FP51841 1108 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 TFAMQ00059 246 aaKnown RBP12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 NCAPHQ15003 741 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 C9orf57Q5W0N0 161 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 LMBRD2Q68DH5 695 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 TRIM59Q8IWR1 403 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 TMEM130Q8N3G9 435 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 C1orf127Q8N9H9 656 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 KLHL23Q8NBE8 558 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 C3orf58Q8NDZ4 430 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 BCL7CQ8WUZ0 217 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 SLC35C1Q96A29 364 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 ANKRD36BP1Q96IX9 119 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 MTMR12Q9C0I1 747 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 NAT10Q9H0A0 1025 aaKnown RBP12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 ARMCX3Q9UH62 379 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 LZTS1Q9Y250 596 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 MTCL1Q9Y4B5 1905 aaKnown RBP12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 TRANK1O15050 2925 aa12.72□□□□□ -0.37
TRAPPC12-212ENST00000457845 EPOPA6NHQ4 379 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 F8W810 466 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 PODXLO00592 558 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 FGF18O76093 207 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 KIF4AO95239 1232 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 CAVIN2O95810 425 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 ITGB1P05556 798 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 TMEM191BP0C7N4 346 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 PAX3P23760 479 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 GTF2H1P32780 548 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 AARSP49588 968 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 ZNF165P49910 485 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 MYL5Q02045 173 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 UBE3AQ05086 875 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 PPP3CAQ08209 521 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 IQCB1Q15051 598 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 ZACNQ401N2 412 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 CDKAL1Q5VV42 579 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 TRAPPC11Q7Z392 1133 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 DDX53Q86TM3 631 aaKnown RBP12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 FBXO22Q8NEZ5 403 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 SPPL3Q8TCT6 385 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 TMEM169Q96HH4 297 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 FAM84AQ96KN4 292 aa12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 C11orf84Q9BUA3 381 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC12-212ENST00000457845 HSD3B7Q9H2F3 369 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms