RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 KCNH6Q9H252 994 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 KCNK12Q9HB15 430 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 TUBGCP4Q9UGJ1 667 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 BACE2Q9Y5Z0 518 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 CDY1Q9Y6F8 540 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 TCHHQ07283 1943 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 A0A087X0B3 334 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 A0A0B4J269 797 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 K7ENM7 598 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 HNRNPDLO14979 420 aaKnown RBP13.5□□□□□ -0.25
VEGFA-210ENST00000457104 KRT18P05783 430 aaKnown RBP13.5□□□□□ -0.25
VEGFA-210ENST00000457104 ADRB2P07550 413 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 HNRNPA1P09651 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
VEGFA-210ENST00000457104 LIG4P49917 911 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 VCPP55072 806 aaKnown RBP13.5□□□□□ -0.25
VEGFA-210ENST00000457104 SPAG1Q07617 926 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 MRPL58Q14197 206 aaKnown RBP13.5□□□□□ -0.25
VEGFA-210ENST00000457104 ENOX2Q16206 610 aaKnown RBP13.5□□□□□ -0.25
VEGFA-210ENST00000457104 ZC2HC1CQ53FD0 456 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-210ENST00000457104 AXDND1Q5T1B0 1012 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-210ENST00000457104 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 BICD1Q96G01 975 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 ST6GALNAC4Q9H4F1 302 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 ZHX3Q9H4I2 956 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 ZSCAN16Q9H4T2 348 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-210ENST00000457104 PLEKHA5Q9HAU0 1116 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 PIDD1Q9HB75 910 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 EPS15L1Q9UBC2 864 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 STK17AQ9UEE5 414 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 TSC2P49815 1807 aa13.5□□□□□ -0.25
VEGFA-210ENST00000457104 MYMKA6NI61 221 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 LACTBL1A8MY62 500 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 ANKRD63C9JTQ0 380 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 OGTO15294 1046 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 TBCAO75347 108 aaKnown RBP13.49□□□□□ -0.25
VEGFA-210ENST00000457104 C8AP07357 584 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 HOXA9P31269 272 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 GBP2P32456 591 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-210ENST00000457104 MATR3P43243 847 aaKnown RBP eCLIP13.49□□□□□ -0.25
VEGFA-210ENST00000457104 NASPP49321 788 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-210ENST00000457104 TDGQ13569 410 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 PPM1LQ5SGD2 360 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 VARS2Q5ST30 1063 aaKnown RBP13.49□□□□□ -0.25
VEGFA-210ENST00000457104 LIN9Q5TKA1 542 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 SLC8B1Q6J4K2 584 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 DYMQ7RTS9 669 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 MAP4K3Q8IVH8 894 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 RSAD2Q8WXG1 361 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 STAMQ92783 540 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 DNAJC19Q96DA6 116 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 SUSD3Q96L08 255 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 STRA6Q9BX79 667 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 IKZF4Q9H2S9 585 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.49□□□□□ -0.254e-7■■■■■ 28.5
VEGFA-210ENST00000457104 CCDC39Q9UFE4 941 aa13.49□□□□□ -0.25
VEGFA-210ENST00000457104 VPS13AQ96RL7 3174 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 TISP43B9A030 160 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 SYN3O14994 580 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 CCL16O15467 120 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 PPP1R37O75864 691 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 ABLIM3O94929 683 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 LAMP2P13473 410 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 AVPR2P30518 371 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 LRPAP1P30533 357 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 NTHL1P78549 312 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 RRAGBQ5VZM2 374 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 ZNF720Q7Z2F6 126 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 GRASPQ7Z6J2 395 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-210ENST00000457104 SFR1Q86XK3 245 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 SUGP1Q8IWZ8 645 aaKnown RBP13.48□□□□□ -0.25
VEGFA-210ENST00000457104 KRI1Q8N9T8 703 aaKnown RBP13.48□□□□□ -0.25
VEGFA-210ENST00000457104 PRSS33Q8NF86 280 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 ZNF461Q8TAF7 563 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 SLC7A14Q8TBB6 771 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 DDX12PQ92771 950 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 PANK2Q9BZ23 570 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 IGSF9Q9P2J2 1179 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 CPSF3Q9UKF6 684 aaKnown RBP13.48□□□□□ -0.25
VEGFA-210ENST00000457104 DUSP12Q9UNI6 340 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 NUB1Q9Y5A7 615 aa13.48□□□□□ -0.25
VEGFA-210ENST00000457104 WDR27A2RRH5 827 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 ANHXE9PGG2 379 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 NARSO43776 548 aaKnown RBP13.47□□□□□ -0.25
VEGFA-210ENST00000457104 POU2F2P09086 479 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 CYP3A5P20815 502 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-210ENST00000457104 ABCD1P33897 745 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 GUCY2FP51841 1108 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 ROR1Q01973 937 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 NHLH1Q02575 133 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 PPP2R3AQ06190 1150 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 KYAT1Q16773 422 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 SV2BQ7L1I2 683 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 RTL10Q7L3V2 364 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 GET4Q7L5D6 327 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-210ENST00000457104 SLC44A3Q8N4M1 653 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 LINC00301Q8NCQ3 95 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 KIF12Q96FN5 646 aa13.47□□□□□ -0.25
VEGFA-210ENST00000457104 MSTO1Q9BUK6 570 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms