RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 DDX27Q96GQ7 796 aaKnown RBP15.32■□□□□ 0.04
SMPD4-215ENST00000457039 ADAM28Q9UKQ2 775 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 MTCH2Q9Y6C9 303 aa15.32■□□□□ 0.04
SMPD4-215ENST00000457039 MYO9BQ13459 2157 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 FSCN2O14926 492 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 PTMSP20962 102 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 RPL13P26373 211 aaKnown RBP15.31■□□□□ 0.04
SMPD4-215ENST00000457039 GUCY2FP51841 1108 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 NLRP12P59046 1061 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 MCCD1P59942 119 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-215ENST00000457039 ERVFC1P60507 584 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 ADAM9Q13443 819 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 KLHL40Q2TBA0 621 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 TTI2Q6NXR4 508 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 DCLRE1AQ6PJP8 1040 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 MLKLQ8NB16 471 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 BEST2Q8NFU1 509 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 CXorf38Q8TB03 319 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 NELFBQ8WX92 580 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 MRPL38Q96DV4 380 aaKnown RBP15.31■□□□□ 0.04
SMPD4-215ENST00000457039 FAM84AQ96KN4 292 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 GAS2L1Q99501 681 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-215ENST00000457039 TSG101Q99816 390 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 DUSP9Q99956 384 aaKnown RBP15.31■□□□□ 0.04
SMPD4-215ENST00000457039 GPR62Q9BZJ7 368 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 CTNND2Q9UQB3 1225 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 PTPRJQ12913 1337 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 ATG2AQ2TAZ0 1938 aa15.31■□□□□ 0.04
SMPD4-215ENST00000457039 ANO9A1A5B4 782 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 PIRO00625 290 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 IRS1P35568 1242 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 CLDN10P78369 228 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 FKBP3Q00688 224 aaKnown RBP15.3■□□□□ 0.04
SMPD4-215ENST00000457039 PAK1Q13153 545 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 PTPROQ16827 1216 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 DPCR1Q3MIW9 517 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 KLHL10Q6JEL2 608 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 FUT10Q6P4F1 479 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 WDR49Q8IV35 697 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 OR5B17Q8NGF7 314 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 PARD3BQ8TEW8 1205 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 HASPINQ8TF76 798 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 MED15Q96RN5 788 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 CGRRF1Q99675 332 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 MKNK1Q9BUB5 465 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 HERC2P3Q9BVR0 1158 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 ZBP1Q9H171 429 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 TLR9Q9NR96 1032 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 INTS13Q9NVM9 706 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 DPP3Q9NY33 737 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 STK39Q9UEW8 545 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 PUF60Q9UHX1 559 aaKnown RBP15.3■□□□□ 0.04
SMPD4-215ENST00000457039 FRMD4BQ9Y2L6 1034 aa15.3■□□□□ 0.04
SMPD4-215ENST00000457039 PPEF2O14830 753 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 CETN3O15182 167 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 TADA2AO75478 443 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 B3GAT3O94766 335 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 SOD2P04179 222 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 CTSAP10619 480 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 FOSL2P15408 326 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 TFAMQ00059 246 aaKnown RBP15.29■□□□□ 0.04
SMPD4-215ENST00000457039 ENPEPQ07075 957 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 C1orf220Q5T0J3 134 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 C9orf57Q5W0N0 161 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 LMBRD2Q68DH5 695 aaPredicted RBP15.29■□□□□ 0.04
SMPD4-215ENST00000457039 SCARA3Q6AZY7 606 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 TAS1R1Q7RTX1 841 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 VPS52Q8N1B4 723 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 C1orf127Q8N9H9 656 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 CACTINQ8WUQ7 758 aaKnown RBP15.29■□□□□ 0.04
SMPD4-215ENST00000457039 CCDC127Q96BQ5 260 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 EEF2KMTQ96G04 330 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 BORCS6Q96GS4 357 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 POP1Q99575 1024 aaKnown RBP15.29■□□□□ 0.04
SMPD4-215ENST00000457039 CHST7Q9NS84 486 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 REV3LO60673 3130 aa15.29■□□□□ 0.04
SMPD4-215ENST00000457039 SF3B1O75533 1304 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMPD4-215ENST00000457039 BICDL2A1A5D9 508 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 LRRIQ3A6PVS8 624 aaPredicted RBP15.28■□□□□ 0.04
SMPD4-215ENST00000457039 DLATP10515 647 aaKnown RBP15.28■□□□□ 0.04
SMPD4-215ENST00000457039 IGFBP4P22692 258 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 PSMC2P35998 433 aaKnown RBP15.28■□□□□ 0.04
SMPD4-215ENST00000457039 AARSP49588 968 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMPD4-215ENST00000457039 STX17P56962 302 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 PDE12Q6L8Q7 609 aaKnown RBP15.28■□□□□ 0.04
SMPD4-215ENST00000457039 CAVIN1Q6NZI2 390 aaKnown RBP15.28■□□□□ 0.04
SMPD4-215ENST00000457039 INTS8Q75QN2 995 aaKnown RBP15.28■□□□□ 0.04
SMPD4-215ENST00000457039 FAM186BQ8IYM0 893 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 ZNF516Q92618 1163 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 FNBP1Q96RU3 617 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 TCF25Q9BQ70 676 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 MTMR12Q9C0I1 747 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 SIX4Q9UIU6 781 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 RWDD2AQ9UIY3 292 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 PCDHGC5Q9Y5F6 944 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 IRAK3Q9Y616 596 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 EYSQ5T1H1 3165 aa15.28■□□□□ 0.04
SMPD4-215ENST00000457039 PRRC2BQ5JSZ5 2229 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms