RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 STX1AQ16623 288 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 UPP1Q16831 310 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 SPATA1Q5VX52 437 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 CSGALNACT2Q8N6G5 542 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 C1orf127Q8N9H9 656 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 CXorf38Q8TB03 319 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 SPPL3Q8TCT6 385 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 SYAP1Q96A49 352 aaPredicted RBP15.23■□□□□ 0.03
TIMP1-205ENST00000456754 IGSF21Q96ID5 467 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 TMEM175Q9BSA9 504 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 SRRTQ9BXP5 876 aaKnown RBP15.23■□□□□ 0.03
TIMP1-205ENST00000456754 GTPBP4Q9BZE4 634 aaKnown RBP15.23■□□□□ 0.03
TIMP1-205ENST00000456754 ASB7Q9H672 318 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 MMRN2Q9H8L6 949 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 KIAA1586Q9HCI6 787 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 DPP3Q9NY33 737 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 SIX4Q9UIU6 781 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 FRMD4BQ9Y2L6 1034 aa15.23■□□□□ 0.03
TIMP1-205ENST00000456754 H3BNC9 293 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 CETN3O15182 167 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 SPTLC1O15269 473 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 LRRN2O75325 713 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 ALDH2P05091 517 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 RPL13P26373 211 aaKnown RBP15.22■□□□□ 0.03
TIMP1-205ENST00000456754 IRS1P35568 1242 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 PSMC2P35998 433 aaKnown RBP15.22■□□□□ 0.03
TIMP1-205ENST00000456754 FKBP3Q00688 224 aaKnown RBP15.22■□□□□ 0.03
TIMP1-205ENST00000456754 PPP3CAQ08209 521 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 MYBPC2Q14324 1141 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 SKOR2Q2VWA4 1001 aaPredicted RBP15.22■□□□□ 0.03
TIMP1-205ENST00000456754 ANO6Q4KMQ2 910 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 C9orf57Q5W0N0 161 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 IRF2BP1Q8IU81 584 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 CD302Q8IX05 232 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 PARD3BQ8TEW8 1205 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 AUTS2Q8WXX7 1259 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 GUCD1Q96NT3 240 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 CGRRF1Q99675 332 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 GPR62Q9BZJ7 368 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 INTS13Q9NVM9 706 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 SPG21Q9NZD8 308 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 UBQLN1Q9UMX0 589 aaKnown RBP15.22■□□□□ 0.03
TIMP1-205ENST00000456754 C2CD2Q9Y426 696 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 PCDHB12Q9Y5F1 795 aa15.22■□□□□ 0.03
TIMP1-205ENST00000456754 PRRC2BQ5JSZ5 2229 aaKnown RBP15.21■□□□□ 0.03
TIMP1-205ENST00000456754 BICDL2A1A5D9 508 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 B3GAT3O94766 335 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 ITGB3P05106 788 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 TNNI1P19237 187 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 POLR2BP30876 1174 aaKnown RBP15.21■□□□□ 0.03
TIMP1-205ENST00000456754 PPP1R2P41236 205 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 VAMP7P51809 220 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 ERVFC1P60507 584 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 POU5F1Q01860 360 aaKnown RBP15.21■□□□□ 0.03
TIMP1-205ENST00000456754 DEFB123Q8N688 67 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 BEST2Q8NFU1 509 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 POF1BQ8WVV4 589 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 MYLIPQ8WY64 445 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.21■□□□□ 0.034e-6■□□□□ 9.6
TIMP1-205ENST00000456754 AAASQ9NRG9 546 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 SAMSN1Q9NSI8 373 aaKnown RBP15.21■□□□□ 0.03
TIMP1-205ENST00000456754 SLC38A7Q9NVC3 462 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 ANO10Q9NW15 660 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 DERAQ9Y315 318 aa15.21■□□□□ 0.03
TIMP1-205ENST00000456754 ANO9A1A5B4 782 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 PIRO00625 290 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 EFEMP2O95967 443 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 CST3P01034 146 aaPredicted RBP15.2■□□□□ 0.02
TIMP1-205ENST00000456754 TMEM191BP0C7N4 346 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 EPB41P11171 864 aaKnown RBP15.2■□□□□ 0.02
TIMP1-205ENST00000456754 CYP3A5P20815 502 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 LRPAP1P30533 357 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 GCLMP48507 274 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 BFSP1Q12934 665 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
TIMP1-205ENST00000456754 TDRD10Q5VZ19 366 aaKnown RBP15.2■□□□□ 0.02
TIMP1-205ENST00000456754 FUT10Q6P4F1 479 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 WDR49Q8IV35 697 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 TMEM169Q96HH4 297 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 SAMD11Q96NU1 681 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 FNBP1Q96RU3 617 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 CDX2Q99626 313 aaPredicted RBP15.2■□□□□ 0.02
TIMP1-205ENST00000456754 COLEC11Q9BWP8 271 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 PLVAPQ9BX97 442 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 AGAP1Q9UPQ3 857 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 RWDD3Q9Y3V2 267 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 TSC2P49815 1807 aa15.2■□□□□ 0.02
TIMP1-205ENST00000456754 TMEM265A0A087WTH1 108 aa15.19■□□□□ 0.02
TIMP1-205ENST00000456754 SLC16A3O15427 465 aaKnown RBP15.19■□□□□ 0.02
TIMP1-205ENST00000456754 TADA2AO75478 443 aa15.19■□□□□ 0.02
TIMP1-205ENST00000456754 VNN1O95497 513 aa15.19■□□□□ 0.02
TIMP1-205ENST00000456754 C4BPAP04003 597 aaKnown RBP15.19■□□□□ 0.02
TIMP1-205ENST00000456754 RB1P06400 928 aa15.19■□□□□ 0.02
TIMP1-205ENST00000456754 KRT19P08727 400 aa15.19■□□□□ 0.02
TIMP1-205ENST00000456754 ERCC5P28715 1186 aaPredicted RBP15.19■□□□□ 0.02
TIMP1-205ENST00000456754 CLDN10P78369 228 aa15.19■□□□□ 0.02
TIMP1-205ENST00000456754 PLCB3Q01970 1234 aa15.19■□□□□ 0.02
TIMP1-205ENST00000456754 CCDC40Q4G0X9 1142 aa15.19■□□□□ 0.02
TIMP1-205ENST00000456754 TIGD5Q53EQ6 642 aa15.19■□□□□ 0.02
TIMP1-205ENST00000456754 DCLRE1AQ6PJP8 1040 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms