RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 GTF3C3Q9Y5Q9 886 aa13.09□□□□□ -0.31
LMCD1-206ENST00000456506 ZFHX4Q86UP3 3567 aa13.09□□□□□ -0.31
LMCD1-206ENST00000456506 F5P12259 2224 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 LAMTOR5O43504 91 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 MOSPD3O75425 235 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 SEC24AO95486 1093 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 NEFLP07196 543 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 MUTP22033 750 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 PROZP22891 400 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 GRM5P41594 1212 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 FOSBP53539 338 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 VARS2Q5ST30 1063 aaKnown RBP13.08□□□□□ -0.32
LMCD1-206ENST00000456506 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 ATF7IP2Q5U623 682 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 TSSK4Q6SA08 328 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 TPRG1Q6ZUI0 275 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 ANKS3Q6ZW76 656 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 TCEAL8Q8IYN2 117 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 MCRS1Q96EZ8 462 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 HEBP1Q9NRV9 189 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 GDE1Q9NZC3 331 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 TNFSF13BQ9Y275 285 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 MRPS23Q9Y3D9 190 aaKnown RBP13.08□□□□□ -0.32
LMCD1-206ENST00000456506 SCN1AP35498 2009 aa13.08□□□□□ -0.32
LMCD1-206ENST00000456506 SPAG17Q6Q759 2223 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 ARHGEF35A5YM69 484 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 MICAL2O94851 1124 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 OR52Z1P0C646 297 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 LIG1P18858 919 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 EFNA5P52803 228 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 CSTF1Q05048 431 aaKnown RBP13.07□□□□□ -0.32
LMCD1-206ENST00000456506 MAPK7Q13164 816 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 ORC2Q13416 577 aaPredicted RBP13.07□□□□□ -0.32
LMCD1-206ENST00000456506 PPP2R5AQ15172 486 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 RSPO4Q2I0M5 234 aaPredicted RBP13.07□□□□□ -0.32
LMCD1-206ENST00000456506 MAMSTRQ6ZN01 415 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 DEPTORQ8TB45 409 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 DNASE1L2Q92874 299 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 TCEAL4Q96EI5 215 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 NELL2Q99435 816 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 ACO2Q99798 780 aaKnown RBP13.07□□□□□ -0.32
LMCD1-206ENST00000456506 ZSCAN32Q9NX65 697 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 ARHGAP28Q9P2N2 729 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
LMCD1-206ENST00000456506 ATF2P15336 505 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 KCNE1P15382 129 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 PTPN2P17706 415 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
LMCD1-206ENST00000456506 EPHA5P54756 1037 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 GUCY1B3Q02153 619 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 MTAPQ13126 283 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 FAM78AQ5JUQ0 283 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 MAP4K3Q8IVH8 894 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 KIFAP3Q92845 792 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 ZSWIM3Q96MP5 696 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 BHMT2Q9H2M3 363 aa13.06□□□□□ -0.32
LMCD1-206ENST00000456506 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
LMCD1-206ENST00000456506 ARNTLO00327 626 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 PODXLO00592 558 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 SYN3O14994 580 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 TRAPPC3O43617 180 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 VNN2O95498 520 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 NPTX2P47972 431 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 ADCY1Q08828 1119 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 ZNF174Q15697 407 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 WDR44Q5JSH3 913 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 VITQ6UXI7 678 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 IGSF22Q8N9C0 903 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 ERMNQ8TAM6 284 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 C18orf25Q96B23 403 aaPredicted RBP13.05□□□□□ -0.32
LMCD1-206ENST00000456506 ASB16Q96NS5 453 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 HINFPQ9BQA5 517 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 CHRDQ9H2X0 955 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 TMEM134Q9H6X4 195 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 PARD6AQ9NPB6 346 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 TRPV5Q9NQA5 729 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 FBXL5Q9UKA1 691 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 INSL5Q9Y5Q6 135 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 HELZP42694 1942 aaKnown RBP13.05□□□□□ -0.32
LMCD1-206ENST00000456506 ANAPC1Q9H1A4 1944 aa13.05□□□□□ -0.32
LMCD1-206ENST00000456506 K7ERI5 159 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 TOB1P50616 345 aaPredicted RBP13.04□□□□□ -0.32
LMCD1-206ENST00000456506 ATXN1P54253 815 aaKnown RBP13.04□□□□□ -0.32
LMCD1-206ENST00000456506 PEX3P56589 373 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 TRIM29Q14134 588 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 GAS6Q14393 721 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 GRM2Q14416 872 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 NBR1Q14596 966 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 TMEM132AQ24JP5 1023 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 ZNF852Q6ZMS4 543 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 TMEM130Q8N3G9 435 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 BEST2Q8NFU1 509 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 SUSD3Q96L08 255 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 IFT74Q96LB3 600 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 CORO1BQ9BR76 489 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 LRRC3Q9BY71 257 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 FOXP1Q9H334 677 aaPredicted RBP13.04□□□□□ -0.32
LMCD1-206ENST00000456506 TRPV4Q9HBA0 871 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms