RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ADAM28Q9UKQ2 775 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 R3HCC1Q9Y3T6 440 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 CITO14578 2027 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 GRM6O15303 877 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 B3GAT3O94766 335 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 TNNC2P02585 160 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 DLATP10515 647 aaKnown RBP15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 EPB41P11171 864 aaKnown RBP15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 IGFBP4P22692 258 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 LRPAP1P30533 357 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 WNT7BP56706 349 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 NFKBIBQ15653 356 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 DUOXA2Q1HG44 320 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 FILIP1Q7Z7B0 1213 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 WDR49Q8IV35 697 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 FAM186BQ8IYM0 893 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 TMC2Q8TDI7 906 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 CEP63Q96MT8 703 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 CDX2Q99626 313 aaPredicted RBP15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 PAAF1Q9BRP4 392 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 MKNK1Q9BUB5 465 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 KIAA1671Q9BY89 1806 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 ANO10Q9NW15 660 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 CACNG4Q9UBN1 327 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 TUBGCP4Q9UGJ1 667 aa15.81■□□□□ 0.12
NCKIPSD-207ENST00000453349 TMEM189-UBE2V1I3L0A0 370 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 TRAPPC3O43617 180 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 LPXNO60711 386 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 AKAP3O75969 853 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 PAX3P23760 479 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 ERCC5P28715 1186 aaPredicted RBP15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 VAMP7P51809 220 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 AP3M2P53677 418 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 ELAVL2Q12926 359 aaKnown RBP15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 TPD52L1Q16890 204 aaPredicted RBP15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 DPCR1Q3MIW9 517 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 PDE12Q6L8Q7 609 aaKnown RBP15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 TTI2Q6NXR4 508 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 INTS8Q75QN2 995 aaKnown RBP15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 TMC7Q7Z402 723 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 TMEM173Q86WV6 379 aaPredicted RBP15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 EFCAB13Q8IY85 973 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 VPS52Q8N1B4 723 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 CSGALNACT2Q8N6G5 542 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 PARD3BQ8TEW8 1205 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 HASPINQ8TF76 798 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 MRPL38Q96DV4 380 aaKnown RBP15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 EEF2KMTQ96G04 330 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 POP1Q99575 1024 aaKnown RBP15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 CGRRF1Q99675 332 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 DUSP9Q99956 384 aaKnown RBP15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 INTS13Q9NVM9 706 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 MARCH5Q9NX47 278 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 NUB1Q9Y5A7 615 aa15.8■□□□□ 0.12
NCKIPSD-207ENST00000453349 SLC16A3O15427 465 aaKnown RBP15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 KIF4AO95239 1232 aa15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 GUCY2FP51841 1108 aa15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 FUT10Q6P4F1 479 aa15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 ZC3H3Q8IXZ2 948 aaKnown RBP15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 BCL7CQ8WUZ0 217 aaPredicted RBP15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 MYLIPQ8WY64 445 aa15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 SRRTQ9BXP5 876 aaKnown RBP15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 TLR9Q9NR96 1032 aa15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 ITGA11Q9UKX5 1188 aa15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 SSX2IPQ9Y2D8 614 aa15.79■□□□□ 0.12
NCKIPSD-207ENST00000453349 SF3B1O75533 1304 aaKnown RBP eCLIP15.78■□□□□ 0.121e-8■■■■■ 103.4
NCKIPSD-207ENST00000453349 F8W810 466 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 PIRO00625 290 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 IKBKBO14920 756 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 PHACTR2O75167 634 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 CXCL14O95715 111 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 GNA14O95837 355 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 KRT19P08727 400 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 POU3F3P20264 500 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 DNAJB1P25685 340 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 CA8P35219 290 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 RBP5P82980 135 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 ENPEPQ07075 957 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 BFSP1Q12934 665 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 STX1AQ16623 288 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 USP41Q3LFD5 358 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 CCDC40Q4G0X9 1142 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 C9orf57Q5W0N0 161 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 LMBRD2Q68DH5 695 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 KIAA1841Q6NSI8 718 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 GUCD1Q96NT3 240 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 GPR62Q9BZJ7 368 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 MTMR12Q9C0I1 747 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 METTL14Q9HCE5 456 aaKnown RBP15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 NGRNQ9NPE2 291 aaKnown RBP15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 ENTPD7Q9NQZ7 604 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 AGAP1Q9UPQ3 857 aa15.78■□□□□ 0.12
NCKIPSD-207ENST00000453349 TRIP11Q15643 1979 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 ANO9A1A5B4 782 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 LRRIQ3A6PVS8 624 aaPredicted RBP15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 STX10O60499 249 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 CSPG5O95196 566 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 SOD2P04179 222 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 ITGB3P05106 788 aa15.77■□□□□ 0.12
NCKIPSD-207ENST00000453349 CCDC192P0DO97 292 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms