RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ING5Q8WYH8 240 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 PTPRHQ9HD43 1115 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 TRPV5Q9NQA5 729 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 HEBP1Q9NRV9 189 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 NCDNQ9UBB6 729 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 TNFSF13BQ9Y275 285 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 WDR27A2RRH5 827 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 PRR5-ARHGAP8B1AHC4 643 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 K7ERI5 159 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
HERC3-207ENST00000452979 LARGE1O95461 756 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 ATF2P15336 505 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 LIG1P18858 919 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 TGM1P22735 817 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 MCM7P33993 719 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 GRM5P41594 1212 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 BRCC3P46736 316 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 ATXN1P54253 815 aaKnown RBP12.81□□□□□ -0.36
HERC3-207ENST00000452979 ARHGAP8P85298 464 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 SOX4Q06945 474 aaPredicted RBP12.81□□□□□ -0.36
HERC3-207ENST00000452979 KIFAP3Q92845 792 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 SECISBP2LQ93073 1101 aaKnown RBP12.81□□□□□ -0.36
HERC3-207ENST00000452979 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 IER2Q9BTL4 223 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 KIFC3Q9BVG8 833 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 GOLGA2P5Q9HBQ8 144 aa12.81□□□□□ -0.36
HERC3-207ENST00000452979 MAN2B1O00754 1011 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 ZNF197O14709 1029 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 SYN3O14994 580 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 JAK2O60674 1132 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 SEC24AO95486 1093 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 LRG1P02750 347 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 TDGF1P13385 188 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 KCNE1P15382 129 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 CEBPBP17676 345 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 ELF1P32519 619 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 RPL9P32969 192 aaKnown RBP12.8□□□□□ -0.36
HERC3-207ENST00000452979 MTAPQ13126 283 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 RABEP1Q15276 862 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 ECM1Q16610 540 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 FAM78AQ5JUQ0 283 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 TSSK4Q6SA08 328 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 MAP4K3Q8IVH8 894 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 ACO2Q99798 780 aaKnown RBP12.8□□□□□ -0.36
HERC3-207ENST00000452979 TMEM134Q9H6X4 195 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 ZFP14Q9HCL3 533 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 POLD4Q9HCU8 107 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 TOPORSQ9NS56 1045 aaPredicted RBP12.8□□□□□ -0.36
HERC3-207ENST00000452979 SLC38A7Q9NVC3 462 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 MAFFQ9ULX9 164 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 SMG5Q9UPR3 1016 aaKnown RBP12.8□□□□□ -0.36
HERC3-207ENST00000452979 CEP250Q9BV73 2442 aa12.8□□□□□ -0.36
HERC3-207ENST00000452979 CITO14578 2027 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 PDCD11Q14690 1871 aaKnown RBP12.79□□□□□ -0.36
HERC3-207ENST00000452979 H7C4K7 107 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 PRRG1O14668 218 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
HERC3-207ENST00000452979 NEK4P51957 841 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 YARSP54577 528 aaKnown RBP12.79□□□□□ -0.36
HERC3-207ENST00000452979 MLLT6P55198 1093 aaPredicted RBP12.79□□□□□ -0.36
HERC3-207ENST00000452979 LMNB2Q03252 620 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 TPGS2Q68CL5 300 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 HAUS3Q68CZ6 603 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 C4orf32Q8N8J7 132 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 IRF7Q92985 503 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 TCEAL4Q96EI5 215 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 ZMAT2Q96NC0 199 aaKnown RBP12.79□□□□□ -0.36
HERC3-207ENST00000452979 ASB16Q96NS5 453 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 CORO1BQ9BR76 489 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 TRMT61BQ9BVS5 477 aaKnown RBP12.79□□□□□ -0.36
HERC3-207ENST00000452979 CCDC94Q9BW85 323 aaPredicted RBP12.79□□□□□ -0.36
HERC3-207ENST00000452979 CDT1Q9H211 546 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 BHMT2Q9H2M3 363 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 CHRDQ9H2X0 955 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 TRPV4Q9HBA0 871 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 CYP4F11Q9HBI6 524 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 ZNF334Q9HCZ1 680 aaPredicted RBP12.79□□□□□ -0.36
HERC3-207ENST00000452979 TICRRQ7Z2Z1 1910 aa12.79□□□□□ -0.36
HERC3-207ENST00000452979 PODXLO00592 558 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 NRG2O14511 850 aaPredicted RBP12.78□□□□□ -0.36
HERC3-207ENST00000452979 ABLIM1O14639 778 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 MOSPD3O75425 235 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 PSMC3P17980 439 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 PROZP22891 400 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 CCR2P41597 374 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 NPTX2P47972 431 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 EPHA5P54756 1037 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 NRLP54845 237 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 PDIA5Q14554 519 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 SAFBQ15424 915 aaKnown RBP eCLIP12.78□□□□□ -0.36
HERC3-207ENST00000452979 ZNF174Q15697 407 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 CYP4A22Q5TCH4 519 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 PDZD4Q76G19 769 aaPredicted RBP12.78□□□□□ -0.36
HERC3-207ENST00000452979 CEP120Q8N960 986 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 SMARCD2Q92925 531 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 ZSWIM3Q96MP5 696 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 FOXP1Q9H334 677 aaPredicted RBP12.78□□□□□ -0.36
HERC3-207ENST00000452979 BRD9Q9H8M2 597 aa12.78□□□□□ -0.36
HERC3-207ENST00000452979 CNTN3Q9P232 1028 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms