RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 AKT3Q9Y243 479 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 IQCA1LA6NCM1 817 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 CCDC188H7C350 402 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 HSF2BPO75031 334 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 LGR5O75473 907 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 VTNP04004 478 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 WEE2P0C1S8 567 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 PYGMP11217 842 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 MAPK4P31152 587 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 GJC1P36383 396 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 SSR1P43307 286 aaKnown RBP12.6□□□□□ -0.39
VTA1-203ENST00000452973 TRPC3Q13507 836 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 SKIDA1Q1XH10 827 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 ATF7IP2Q5U623 682 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 ZPBP2Q6X784 338 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 TMEM192Q8IY95 271 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 CCDC26Q8TAB7 109 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 ZSWIM1Q9BR11 485 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 ERAP1Q9NZ08 941 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
VTA1-203ENST00000452973 ZC3H4Q9UPT8 1303 aaKnown RBP12.6□□□□□ -0.39
VTA1-203ENST00000452973 EVPLQ92817 2033 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 LOC285556D6RIA3 1793 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 GOLGA6L10A0A0M3HER8 536 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.59□□□□□ -0.39
VTA1-203ENST00000452973 OGTO15294 1046 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 HBP1O60381 514 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 GJB6O95452 261 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 KRT14P02533 472 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 CLTAP09496 248 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 IQCF3P0C7M6 154 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 CCNA1P78396 465 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 PPARDQ03181 441 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 MAATS1Q7Z4T9 603 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 BRSK2Q8IWQ3 736 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 CCDC113Q9H0I3 377 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 ZNFX1Q9P2E3 1918 aaKnown RBP12.59□□□□□ -0.39
VTA1-203ENST00000452973 TCRBV7S2A1N4TA0A589 114 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 CYP1A2P05177 515 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 TMEM191BP0C7N4 346 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 ACO1P21399 889 aaKnown RBP12.59□□□□□ -0.39
VTA1-203ENST00000452973 MCCD1P59942 119 aaPredicted RBP12.59□□□□□ -0.39
VTA1-203ENST00000452973 SEL1L2Q5TEA6 688 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 KCTD16Q68DU8 428 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 MCOLN2Q8IZK6 566 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 RUBCNQ92622 972 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 C18orf8Q96DM3 657 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 NEUROG2Q9H2A3 272 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.59□□□□□ -0.39
VTA1-203ENST00000452973 A0A087WZ62 844 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 LGALS2P05162 132 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 ARHGAP1Q07960 439 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 CFAP58Q5T655 872 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 PNMA8AQ86V59 439 aaPredicted RBP12.59□□□□□ -0.39
VTA1-203ENST00000452973 BRI3BPQ8WY22 251 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 CPB2Q96IY4 423 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 ZIM3Q96PE6 472 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 FDXACB1Q9BRP7 624 aaPredicted RBP12.59□□□□□ -0.39
VTA1-203ENST00000452973 CENPHQ9H3R5 247 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 USTQ9Y2C2 406 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 PTPN22Q9Y2R2 807 aa12.59□□□□□ -0.39
VTA1-203ENST00000452973 UTP11Q9Y3A2 253 aaKnown RBP12.59□□□□□ -0.39
VTA1-203ENST00000452973 MIF4GDA9UHW6 222 aaKnown RBP12.58□□□□□ -0.4
VTA1-203ENST00000452973 CXCL8P10145 99 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 CETPP11597 493 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 UNGP13051 313 aaPredicted RBP12.58□□□□□ -0.4
VTA1-203ENST00000452973 AARSP49588 968 aaKnown RBP eCLIP12.58□□□□□ -0.4
VTA1-203ENST00000452973 BPIFB4P59827 614 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 DR1Q01658 176 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 TFDP1Q14186 410 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 DUOXA2Q1HG44 320 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 MMS22LQ6ZRQ5 1243 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 MSL3Q8N5Y2 521 aaKnown RBP12.58□□□□□ -0.4
VTA1-203ENST00000452973 IGKV6-21A0A0C4DH24 114 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 FLT3P36888 993 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 HADHBP55084 474 aaKnown RBP12.58□□□□□ -0.4
VTA1-203ENST00000452973 TAPT1Q6NXT6 567 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 CAVIN3Q969G5 261 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 MAGOHBQ96A72 148 aaKnown RBP12.58□□□□□ -0.4
VTA1-203ENST00000452973 MS4A4AQ96JQ5 239 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 NAP1L3Q99457 506 aaPredicted RBP12.58□□□□□ -0.4
VTA1-203ENST00000452973 ADAM22Q9P0K1 906 aa12.58□□□□□ -0.4
VTA1-203ENST00000452973 MYO1FO00160 1098 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 FAM189A1O60320 539 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 TNFRSF8P28908 595 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 CYP2C19P33261 490 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 PEX5P50542 639 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 ORC1Q13415 861 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 CDCA2Q69YH5 1023 aaPredicted RBP12.57□□□□□ -0.4
VTA1-203ENST00000452973 MPZL3Q6UWV2 235 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 RPS6KC1Q96S38 1066 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 WNT8AQ9H1J5 351 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 C2orf40Q9H1Z8 148 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 SLITRK6Q9H5Y7 841 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.57□□□□□ -0.4
VTA1-203ENST00000452973 UVRAGQ9P2Y5 699 aa12.57□□□□□ -0.4
VTA1-203ENST00000452973 CPSF3Q9UKF6 684 aaKnown RBP12.57□□□□□ -0.4
VTA1-203ENST00000452973 DNAH12Q6ZR08 3092 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms