RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 PALB2Q86YC2 1186 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 HDAC7Q8WUI4 952 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 LMBR1Q8WVP7 490 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 KAT5Q92993 513 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 AGPAT1Q99943 283 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 NIFKQ9BYG3 293 aaKnown RBP11.53□□□□□ -0.56
PKP4-206ENST00000452162 GOLPH3Q9H4A6 298 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 DHX33Q9H6R0 707 aaKnown RBP11.53□□□□□ -0.56
PKP4-206ENST00000452162 TMEM8AQ9HCN3 771 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 TRPC6Q9Y210 931 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 STXBP5LQ9Y2K9 1186 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 SCN5AQ14524 2016 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 C17orf102A2RUQ5 167 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 HNRNPDLO14979 420 aaKnown RBP11.53□□□□□ -0.56
PKP4-206ENST00000452162 KIAA0355O15063 1070 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 TREHO43280 583 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 MYBL2P10244 700 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 INSRRP14616 1297 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 OAS2P29728 719 aaKnown RBP11.53□□□□□ -0.56
PKP4-206ENST00000452162 GTF2H1P32780 548 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 ABCD1P33897 745 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 PPFIA1Q13136 1202 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 MAP9Q49MG5 647 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 KRT39Q6A163 491 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 GPD1LQ8N335 351 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 SLC20A1Q8WUM9 679 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 TRAPPC12Q8WVT3 735 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 RFFLQ8WZ73 363 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 POMGNT1Q8WZA1 660 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 CCDC127Q96BQ5 260 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 ZBTB10Q96DT7 871 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 KREMEN1Q96MU8 473 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 PPP1R12CQ9BZL4 782 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 TOPORSQ9NS56 1045 aaPredicted RBP11.53□□□□□ -0.56
PKP4-206ENST00000452162 TAS2R14Q9NYV8 317 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 PRKAG2Q9UGJ0 569 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 DMGDHQ9UI17 866 aaKnown RBP11.53□□□□□ -0.56
PKP4-206ENST00000452162 NOD1Q9Y239 953 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 UMODL1Q5DID0 1318 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 TET1Q8NFU7 2136 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 H3BQF6 201 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 ARL2P36404 184 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 MATR3P43243 847 aaKnown RBP eCLIP11.52□□□□□ -0.571e-6■■■■□ 23.3
PKP4-206ENST00000452162 DNA2P51530 1060 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 GPC3P51654 580 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 POLGP54098 1239 aaPredicted RBP11.52□□□□□ -0.57
PKP4-206ENST00000452162 IGBP1P78318 339 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 ADAM17P78536 824 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 GRIK4Q16099 956 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 FAM71AQ8IYT1 594 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 ASAP3Q8TDY4 903 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 TAF4BQ92750 862 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 WNT8BQ93098 351 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 PBKQ96KB5 322 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 POP1Q99575 1024 aaKnown RBP11.52□□□□□ -0.57
PKP4-206ENST00000452162 SUCLA2Q9P2R7 463 aaPredicted RBP11.52□□□□□ -0.57
PKP4-206ENST00000452162 KCNG1Q9UIX4 513 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 TMCO5BA8MYB1 307 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 RAG1P15918 1043 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 SCP2P22307 547 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 CYP2C18P33260 490 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 SLC26A2P50443 739 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 TERF2Q15554 542 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 GLE1Q53GS7 698 aaKnown RBP11.52□□□□□ -0.57
PKP4-206ENST00000452162 MARCH8Q5T0T0 291 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 SYCE1Q8N0S2 351 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 ATP8B4Q8TF62 1192 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 SHC3Q92529 594 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 DHX38Q92620 1227 aaKnown RBP11.52□□□□□ -0.57
PKP4-206ENST00000452162 TMEM143Q96AN5 459 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 ARHGEF26Q96DR7 871 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 TMEM59LQ9UK28 342 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 NOCTQ9UK39 431 aaKnown RBP11.52□□□□□ -0.57
PKP4-206ENST00000452162 STYXL1Q9Y6J8 313 aa11.52□□□□□ -0.57
PKP4-206ENST00000452162 NRCAMQ92823 1304 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 KCNK3O14649 394 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 PIGRP01833 764 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 GLRA2P23416 452 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 TNFRSF8P28908 595 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 DMTNQ08495 405 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 TARBP2Q15633 366 aaKnown RBP11.51□□□□□ -0.57
PKP4-206ENST00000452162 NT5DC3Q86UY8 548 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 GSPT2Q8IYD1 628 aaKnown RBP11.51□□□□□ -0.57
PKP4-206ENST00000452162 USP38Q8NB14 1042 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 SLC35G2Q8TBE7 412 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 HELQQ8TDG4 1101 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 TAS1R2Q8TE23 839 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 AENQ8WTP8 325 aaKnown RBP11.51□□□□□ -0.57
PKP4-206ENST00000452162 CTNNBL1Q8WYA6 563 aaPredicted RBP11.51□□□□□ -0.57
PKP4-206ENST00000452162 BADQ92934 168 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 BICD1Q96G01 975 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 HIPK3Q9H422 1215 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 VIPAS39Q9H9C1 493 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 OSGEPQ9NPF4 335 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 STIM2Q9P246 746 aa11.51□□□□□ -0.57
PKP4-206ENST00000452162 TRIOBPQ9H2D6 2365 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 ANKRD62A6NC57 917 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 ZBTB42B2RXF5 422 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 HBP1O60381 514 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 BUB1BO60566 1050 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms