RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ROR1Q01973 937 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 SNW1Q13573 536 aaKnown RBP11.94□□□□□ -0.5
USP1-204ENST00000452143 ZNF528Q3MIS6 628 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 CD300LGQ6UXG3 332 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 ALKAL1Q6UXT8 129 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 C4orf32Q8N8J7 132 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 CEP120Q8N960 986 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 FAM184AQ8NB25 1140 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 C3orf58Q8NDZ4 430 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 ZNF461Q8TAF7 563 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 KCNG4Q8TDN1 519 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 ZSCAN31Q96LW9 406 aaPredicted RBP11.94□□□□□ -0.5
USP1-204ENST00000452143 ACO2Q99798 780 aaKnown RBP11.94□□□□□ -0.5
USP1-204ENST00000452143 TIPINQ9BVW5 301 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 BCO2Q9BYV7 579 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 GOLGA2P5Q9HBQ8 144 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 PTPRHQ9HD43 1115 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 SH2B1Q9NRF2 756 aaPredicted RBP11.94□□□□□ -0.5
USP1-204ENST00000452143 HCFC1R1Q9NWW0 138 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 PPP4R2Q9NY27 417 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 DNMT3BQ9UBC3 853 aaKnown RBP11.94□□□□□ -0.5
USP1-204ENST00000452143 MRPS23Q9Y3D9 190 aaKnown RBP11.94□□□□□ -0.5
USP1-204ENST00000452143 RBM19Q9Y4C8 960 aaKnown RBP11.94□□□□□ -0.5
USP1-204ENST00000452143 R4GN57 208 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 COL4A2P08572 1712 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 F5P12259 2224 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 COL4A3Q01955 1670 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 NCOR2Q9Y618 2525 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 CCDC169A6NNP5 214 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 PODXLO00592 558 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 ECI2O75521 394 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 ABLIM3O94929 683 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 LRG1P02750 347 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 KCNE1P15382 129 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 PROZP22891 400 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 PRPHP41219 470 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 PEX3P56589 373 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 SOX4Q06945 474 aaPredicted RBP11.93□□□□□ -0.5
USP1-204ENST00000452143 PTGDRQ13258 359 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 SLC44A4Q53GD3 710 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
USP1-204ENST00000452143 ERICH6BQ5W0A0 696 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 KRT79Q5XKE5 535 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 DAW1Q8N136 415 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 KCTD17Q8N5Z5 321 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 KXD1Q9BQD3 176 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 CNTN3Q9P232 1028 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 KCNG1Q9UIX4 513 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 FBXO4Q9UKT5 387 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 DNM3Q9UQ16 869 aa11.93□□□□□ -0.5
USP1-204ENST00000452143 WDR27A2RRH5 827 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 H7C4K7 107 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 SPTLC1O15269 473 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 HIP1RO75146 1068 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 MICAL2O94851 1124 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 RHOP08100 348 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 ATF2P15336 505 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 ELF1P32519 619 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 RPL9P32969 192 aaKnown RBP11.92□□□□□ -0.5
USP1-204ENST00000452143 BRCC3P46736 316 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 NBR1Q14596 966 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 UBXN2BQ14CS0 331 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 SLC5A9Q2M3M2 681 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 TPGS2Q68CL5 300 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 MPZL3Q6UWV2 235 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 TAS1R3Q7RTX0 852 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 TCEAL8Q8IYN2 117 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 ST13P5Q8NFI4 369 aaPredicted RBP11.92□□□□□ -0.5
USP1-204ENST00000452143 ING5Q8WYH8 240 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 RUBCNQ92622 972 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 DNASE1L2Q92874 299 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 ZMAT2Q96NC0 199 aaKnown RBP11.92□□□□□ -0.5
USP1-204ENST00000452143 ACAP3Q96P50 834 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 NELL2Q99435 816 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 LTB4R2Q9NPC1 389 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 KMT5AQ9NQR1 393 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 MAFFQ9ULX9 164 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 NUB1Q9Y5A7 615 aa11.92□□□□□ -0.5
USP1-204ENST00000452143 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.92□□□□□ -0.5
USP1-204ENST00000452143 E9PMD0 336 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 I3L4J1 428 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 ABLIM1O14639 778 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 PRRG1O14668 218 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 ZNF197O14709 1029 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 NCAM2O15394 837 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 LAMTOR5O43504 91 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 TBC1D4O60343 1298 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 KINO60870 393 aaKnown RBP11.91□□□□□ -0.5
USP1-204ENST00000452143 TOM1L1O75674 476 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 PTPN2P17706 415 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 IGFBP6P24592 240 aaPredicted RBP11.91□□□□□ -0.5
USP1-204ENST00000452143 GUCY2CP25092 1073 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 OSTNP61366 133 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 MAPK7Q13164 816 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 MRPL58Q14197 206 aaKnown RBP11.91□□□□□ -0.5
USP1-204ENST00000452143 NOLC1Q14978 699 aaKnown RBP eCLIP11.91□□□□□ -0.5
USP1-204ENST00000452143 ZNF280DQ6N043 979 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 RINT1Q6NUQ1 792 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 TPRG1Q6ZUI0 275 aa11.91□□□□□ -0.5
USP1-204ENST00000452143 MAML2Q8IZL2 1156 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms