RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 MTRRQ9UBK8 725 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 KIAA1024Q9UPX6 916 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 F5P12259 2224 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 PDCD11Q14690 1871 aaKnown RBP11.17□□□□□ -0.62
LINC01004-202ENST00000450686 TICRRQ7Z2Z1 1910 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 MED19A0JLT2 244 aaPredicted RBP11.16□□□□□ -0.62
LINC01004-202ENST00000450686 CCDC169A6NNP5 214 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 SFI1A8K8P3 1242 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 E9PMD0 336 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 XRCC6P12956 609 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC01004-202ENST00000450686 RPA1P27694 616 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 CDR1P51861 262 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 PEX3P56589 373 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 RAD51AP2Q09MP3 1159 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 RAB33AQ14088 237 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 GRM2Q14416 872 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 MLF2Q15773 248 aaPredicted RBP11.16□□□□□ -0.62
LINC01004-202ENST00000450686 UPP1Q16831 310 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 PHLDB3Q6NSJ2 640 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 KCNK18Q7Z418 384 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 DAW1Q8N136 415 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 C4orf32Q8N8J7 132 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 ZBTB45Q96K62 511 aaPredicted RBP11.16□□□□□ -0.62
LINC01004-202ENST00000450686 ADPGKQ9BRR6 497 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 RUSC1Q9BVN2 902 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 TARS2Q9BW92 718 aaKnown RBP11.16□□□□□ -0.62
LINC01004-202ENST00000450686 CDT1Q9H211 546 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 DDX19AQ9NUU7 478 aaKnown RBP11.16□□□□□ -0.62
LINC01004-202ENST00000450686 SPATA6Q9NWH7 488 aaPredicted RBP11.16□□□□□ -0.62
LINC01004-202ENST00000450686 MRPS23Q9Y3D9 190 aaKnown RBP11.16□□□□□ -0.62
LINC01004-202ENST00000450686 MYH11P35749 1972 aa11.16□□□□□ -0.62
LINC01004-202ENST00000450686 SMIM28A0A1B0GU29 152 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 WDR27A2RRH5 827 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 HIP1RO75146 1068 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 XYLBO75191 536 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 SEC24AO95486 1093 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 RHOP08100 348 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 HNRNPA1P09651 372 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC01004-202ENST00000450686 GJA1P17302 382 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 TARSP26639 723 aaKnown RBP11.15□□□□□ -0.62
LINC01004-202ENST00000450686 CCR2P41597 374 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 TOB1P50616 345 aaPredicted RBP11.15□□□□□ -0.62
LINC01004-202ENST00000450686 STARD6P59095 220 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 ROR1Q01973 937 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 SPAG1Q07617 926 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 SAFBQ15424 915 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC01004-202ENST00000450686 ZRSR1Q15695 479 aaKnown RBP11.15□□□□□ -0.62
LINC01004-202ENST00000450686 IL17AQ16552 155 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 DCAF4L1Q3SXM0 396 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 ZNF568Q3ZCX4 644 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 SLC44A4Q53GD3 710 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 TANGO2Q6ICL3 276 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 TPRG1Q6ZUI0 275 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 GPIHBP1Q8IV16 184 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 GPR65Q8IYL9 337 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 ZNF687Q8N1G0 1237 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 ERMNQ8TAM6 284 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 SNX29Q8TEQ0 813 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 NXPE3Q969Y0 559 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 IFT74Q96LB3 600 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 PLIN2Q99541 437 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 CORO1BQ9BR76 489 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 HEBP1Q9NRV9 189 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 PCDHB6Q9Y5E3 794 aa11.15□□□□□ -0.62
LINC01004-202ENST00000450686 ANK1P16157 1881 aa11.15□□□□□ -0.63
LINC01004-202ENST00000450686 NCANO14594 1321 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 KANSL1LA0AUZ9 987 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 SHISA7A6NL88 538 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 FAM170BA6NMN3 283 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 PODXLO00592 558 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 NPTX2P47972 431 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 CSTF1Q05048 431 aaKnown RBP11.14□□□□□ -0.63
LINC01004-202ENST00000450686 MTSS1LQ765P7 747 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 ZSWIM3Q96MP5 696 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 ACO2Q99798 780 aaKnown RBP11.14□□□□□ -0.63
LINC01004-202ENST00000450686 DDX23Q9BUQ8 820 aaKnown RBP11.14□□□□□ -0.63
LINC01004-202ENST00000450686 LTB4R2Q9NPC1 389 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 ANKFY1Q9P2R3 1169 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 LRWD1Q9UFC0 647 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 TUBGCP4Q9UGJ1 667 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 COL4A2P08572 1712 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 EPG5Q9HCE0 2579 aa11.14□□□□□ -0.63
LINC01004-202ENST00000450686 NPHP3-ACAD11A0A0J9YXS1 232 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 TMEM189-UBE2V1I3L0A0 370 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 K7ERI5 159 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 ABLIM1O14639 778 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 PRRG1O14668 218 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 SLC16A4O15374 487 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 C1RP00736 705 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 FCARP24071 287 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 HOXA9P31269 272 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 GRM5P41594 1212 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 GUCY2FP51841 1108 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 ELAVL2Q12926 359 aaKnown RBP11.13□□□□□ -0.63
LINC01004-202ENST00000450686 MAPK7Q13164 816 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 PTGDRQ13258 359 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 GNL2Q13823 731 aaKnown RBP11.13□□□□□ -0.63
LINC01004-202ENST00000450686 PPP2R5AQ15172 486 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 HAUS3Q68CZ6 603 aa11.13□□□□□ -0.63
LINC01004-202ENST00000450686 SUMF1Q8NBK3 374 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms