RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 PRMT9Q6P2P2 845 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 POTEGQ6S5H5 508 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 FKBP9P1Q75LS8 142 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 STRA8Q7Z7C7 330 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MICU3Q86XE3 530 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 VPS37DQ86XT2 251 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 GSPT2Q8IYD1 628 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 ZNF713Q8N859 430 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 ENDOVQ8N8Q3 282 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 RTL3Q8N8U3 475 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 CAPSLQ8WWF8 208 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MED30Q96HR3 178 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 CDHR1Q96JP9 859 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PGBD1Q96JS3 809 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 RMDN3Q96TC7 470 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 CINPQ9BW66 212 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 TRIM8Q9BZR9 551 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 NOL6Q9H6R4 1146 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 CAB39LQ9H9S4 337 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 EFCAB1Q9HAE3 211 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ARHGEF10LQ9HCE6 1279 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 SCN3BQ9NY72 215 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 WHRNQ9P202 907 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 APPL1Q9UKG1 709 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 BAG5Q9UL15 447 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PCDHA5Q9Y5H7 936 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ALKQ9UM73 1620 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 FRMPD4Q14CM0 1322 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TET3O43151 1660 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 UGGT1Q9NYU2 1555 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 KPNA3O00505 521 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 PDPK1O15530 556 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PSTPIP1O43586 416 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PALMO75781 387 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 DDHD2O94830 711 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ITGB3P05106 788 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PABPC1P11940 636 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 TKTP29401 623 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 IST1P53990 364 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 NCALDP61601 193 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ATP1A4Q13733 1029 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 EFTUD2Q15029 972 aaKnown RBP eCLIP2.32□□□□□ -2.04
USP53-202ENST00000450251 KCTD21Q4G0X4 260 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TTMPQ5BVD1 217 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 KIAA1755Q5JYT7 1200 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 EMC10Q5UCC4 262 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TBC1D9BQ66K14 1250 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TLDC1Q6P9B6 456 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 DSTYKQ6XUX3 929 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 RBM44Q6ZP01 1051 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 DHDDSQ86SQ9 333 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ZNF654Q8IZM8 581 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MYO1HQ8N1T3 1032 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TTC13Q8NBP0 860 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PHC3Q8NDX5 983 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 WDR36Q8NI36 951 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 GDPD5Q8WTR4 605 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 RSAD2Q8WXG1 361 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 NSMCE3Q96MG7 304 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 AGBL1Q96MI9 1066 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ACAT2Q9BWD1 397 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 OSBPL11Q9BXB4 747 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PAIP1Q9H074 479 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 KLHL31Q9H511 634 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 BRD9Q9H8M2 597 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ATP8A2Q9NTI2 1148 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 LNPEPQ9UIQ6 1025 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PNMA2Q9UL42 364 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PHTF1Q9UMS5 762 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ERVK-11Q9UQG0 969 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 LRRC42Q9Y546 428 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PCDHGA3Q9Y5H0 932 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 KIF20BQ96Q89 1820 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 MAP3K19Q56UN5 1328 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TMEM120BA0PK00 339 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ARHGEF37A1IGU5 675 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CENPXA8MT69 81 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TRAF5O00463 557 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 DDAH1O94760 285 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CHEK2O96017 543 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SLC5A1P13866 664 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ERP29P30040 261 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 HOXD12P35452 270 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 IL15P40933 162 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 CASP5P51878 434 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SEC24CP53992 1094 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 SNAP25P60880 206 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CYP4F2P78329 520 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 POU5F1Q01860 360 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 PTPN12Q05209 780 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 CYP4F3Q08477 520 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 C4orf22Q6V702 233 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 CATSPER3Q86XQ3 398 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 DIS3L2Q8IYB7 885 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 C16orf71Q8IYS4 520 aaPredicted RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 SPARTQ8N0X7 666 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 ZCCHC7Q8N3Z6 543 aaKnown RBP2.31□□□□□ -2.04
USP53-202ENST00000450251 SH2D3CQ8N5H7 860 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 PIK3C3Q8NEB9 887 aa2.31□□□□□ -2.04
USP53-202ENST00000450251 TMIEQ8NEW7 156 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms