RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 DHX38Q92620 1227 aaKnown RBP15.32■□□□□ 0.04
USP39-207ENST00000450066 ARID3AQ99856 593 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 PACSIN1Q9BY11 444 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 CELF4Q9BZC1 486 aaKnown RBP15.32■□□□□ 0.04
USP39-207ENST00000450066 NUB1Q9Y5A7 615 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 ANK1P16157 1881 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 TACC1O75410 805 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 NPTXRO95502 500 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 CYP11B1P15538 503 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 MYL6P60660 151 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 TRPC3Q13507 836 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 RNF180Q86T96 592 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 RSPH3Q86UC2 560 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 SERINC5Q86VE9 423 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 CD302Q8IX05 232 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 SLC20A1Q8WUM9 679 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 ZNF296Q8WUU4 475 aaPredicted RBP15.32■□□□□ 0.04
USP39-207ENST00000450066 NOX5Q96PH1 765 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 CCDC94Q9BW85 323 aaPredicted RBP15.32■□□□□ 0.04
USP39-207ENST00000450066 SALL4Q9UJQ4 1053 aa15.32■□□□□ 0.04
USP39-207ENST00000450066 UQCRHLA0A096LP55 91 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
USP39-207ENST00000450066 UQCRHP07919 91 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 NFICP08651 508 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 H2AFZP0C0S5 128 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 KRT5P13647 590 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 ACO1P21399 889 aaKnown RBP15.31■□□□□ 0.04
USP39-207ENST00000450066 MRPS6P82932 125 aaKnown RBP15.31■□□□□ 0.04
USP39-207ENST00000450066 TUBB2AQ13885 445 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 FAM47CQ5HY64 1035 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 SMYD5Q6GMV2 418 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 JADE1Q6IE81 842 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 H2AFVQ71UI9 128 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 NOP9Q86U38 636 aaKnown RBP15.31■□□□□ 0.04
USP39-207ENST00000450066 RPAINQ86UA6 219 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 NT5DC4Q86YG4 428 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 SLAIN1Q8ND83 568 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 TAF4BQ92750 862 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 TUBB2BQ9BVA1 445 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 PLEKHA5Q9HAU0 1116 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 C2CD2Q9Y426 696 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 M0QZ92 97 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 CABYRO75952 493 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 MOCS3O95396 460 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 PDE6CP51160 858 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 BPIFB4P59827 614 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 SCARA3Q6AZY7 606 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 RPUSD2Q8IZ73 545 aaKnown RBP15.31■□□□□ 0.04
USP39-207ENST00000450066 ALS2CR12Q96Q35 445 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 XYLT2Q9H1B5 865 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 CNTN6Q9UQ52 1028 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 MRFAP1Q9Y605 127 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 CAPN6Q9Y6Q1 641 aa15.31■□□□□ 0.04
USP39-207ENST00000450066 ANO9A1A5B4 782 aa15.3■□□□□ 0.04
USP39-207ENST00000450066 INHAP05111 366 aa15.3■□□□□ 0.04
USP39-207ENST00000450066 CHRNB2P17787 502 aa15.3■□□□□ 0.04
USP39-207ENST00000450066 CDR2Q01850 454 aa15.3■□□□□ 0.04
USP39-207ENST00000450066 TMEM132DQ14C87 1099 aa15.3■□□□□ 0.04
USP39-207ENST00000450066 C1orf127Q8N9H9 656 aa15.3■□□□□ 0.04
USP39-207ENST00000450066 EIF2AQ9BY44 585 aaKnown RBP15.3■□□□□ 0.04
USP39-207ENST00000450066 NIF3L1Q9GZT8 377 aa15.3■□□□□ 0.04
USP39-207ENST00000450066 SEPT11Q9NVA2 429 aaKnown RBP15.3■□□□□ 0.04
USP39-207ENST00000450066 PIN4Q9Y237 131 aaKnown RBP15.3■□□□□ 0.04
USP39-207ENST00000450066 PCDHB2Q9Y5E7 798 aa15.3■□□□□ 0.04
USP39-207ENST00000450066 GRIN2DO15399 1336 aa15.3■□□□□ 0.04
USP39-207ENST00000450066 UMODL1Q5DID0 1318 aa15.3■□□□□ 0.04
USP39-207ENST00000450066 A0A0A6YYK5 440 aaPredicted RBP15.29■□□□□ 0.04
USP39-207ENST00000450066 SLU7O95391 586 aaKnown RBP15.29■□□□□ 0.04
USP39-207ENST00000450066 ZNF699Q32M78 642 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 ZNF677Q86XU0 584 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 PALB2Q86YC2 1186 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 DDX1Q92499 740 aaKnown RBP15.29■□□□□ 0.04
USP39-207ENST00000450066 FAXDC2Q96IV6 333 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 ACP6Q9NPH0 428 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 SIX4Q9UIU6 781 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 DERAQ9Y315 318 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 JRKLQ9Y4A0 524 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 TRPV2Q9Y5S1 764 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 BRCA2P51587 3418 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 CTIFO43310 598 aaKnown RBP15.29■□□□□ 0.04
USP39-207ENST00000450066 CLSTN1O94985 981 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 GZMAP12544 262 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 ACLYP53396 1101 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 GALCP54803 685 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 NAP1L1P55209 391 aaKnown RBP15.29■□□□□ 0.04
USP39-207ENST00000450066 FMO1Q01740 532 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 UBR7Q8N806 425 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 CXorf38Q8TB03 319 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 TRIM6Q9C030 488 aaPredicted RBP15.29■□□□□ 0.04
USP39-207ENST00000450066 ISCUQ9H1K1 167 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 SNTG2Q9NY99 539 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 CDY2AQ9Y6F7 541 aa15.29■□□□□ 0.04
USP39-207ENST00000450066 BUB1O43683 1085 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 MMEP08473 750 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 TMEM253P0C7T8 217 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 GRK4P32298 578 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 YARSP54577 528 aaKnown RBP15.28■□□□□ 0.04
USP39-207ENST00000450066 AMPD2Q01433 879 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 PTGISQ16647 500 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 TAF3Q5VWG9 929 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms