RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 NMT1P30419 496 aaKnown RBP16.65■□□□□ 0.26
CHD3-205ENST00000449744 MCM4P33991 863 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 SLC39A14Q15043 492 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 STK38Q15208 465 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 CCDC73Q6ZRK6 1079 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 SV2BQ7L1I2 683 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 DYMQ7RTS9 669 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 KIF12Q96FN5 646 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 HAPLN2Q9GZV7 340 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 RPF1Q9H9Y2 349 aaKnown RBP16.65■□□□□ 0.26
CHD3-205ENST00000449744 POLIQ9UNA4 740 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.65■□□□□ 0.26
CHD3-205ENST00000449744 SYN3O14994 580 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 OGTO15294 1046 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 MEFVO15553 781 aaPredicted RBP16.64■□□□□ 0.25
CHD3-205ENST00000449744 XPOTO43592 962 aaKnown RBP16.64■□□□□ 0.25
CHD3-205ENST00000449744 XYLBO75191 536 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 PAPLNO95428 1278 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 GTF2BQ00403 316 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 SPAG1Q07617 926 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 VARS2Q5ST30 1063 aaKnown RBP16.64■□□□□ 0.25
CHD3-205ENST00000449744 AXDND1Q5T1B0 1012 aaPredicted RBP16.64■□□□□ 0.25
CHD3-205ENST00000449744 GET4Q7L5D6 327 aaPredicted RBP16.64■□□□□ 0.25
CHD3-205ENST00000449744 SLC7A14Q8TBB6 771 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 ZNF396Q96N95 335 aaPredicted RBP16.64■□□□□ 0.25
CHD3-205ENST00000449744 MSTO1Q9BUK6 570 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 KCNK12Q9HB15 430 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 IGSF9Q9P2J2 1179 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 TUBGCP4Q9UGJ1 667 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 UBQLN1Q9UMX0 589 aaKnown RBP16.64■□□□□ 0.25
CHD3-205ENST00000449744 VWA8A3KMH1 1905 aa16.64■□□□□ 0.25
CHD3-205ENST00000449744 MYO10Q9HD67 2058 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 TTC26A0AVF1 554 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 H7C4K7 107 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 HOXA9P31269 272 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 TNFSF9P41273 254 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 STAT6P42226 847 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 TDGQ13569 410 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 ZC2HC1CQ53FD0 456 aaPredicted RBP16.63■□□□□ 0.25
CHD3-205ENST00000449744 GRASPQ7Z6J2 395 aaPredicted RBP16.63■□□□□ 0.25
CHD3-205ENST00000449744 SFR1Q86XK3 245 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 MAP4K3Q8IVH8 894 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 DDX12PQ92771 950 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 FAM212AQ96EL1 285 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 FIZ1Q96SL8 496 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 SMOC2Q9H3U7 446 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 ST6GALNAC4Q9H4F1 302 aa16.63■□□□□ 0.25
CHD3-205ENST00000449744 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHD3-205ENST00000449744 MORC2Q9Y6X9 1032 aaPredicted RBP16.63■□□□□ 0.25
CHD3-205ENST00000449744 A0A0B4J269 797 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 MYMKA6NI61 221 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 LACTBL1A8MY62 500 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 CCL16O15467 120 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 N4BP1O75113 896 aaKnown RBP16.62■□□□□ 0.25
CHD3-205ENST00000449744 PDIA4P13667 645 aaKnown RBP16.62■□□□□ 0.25
CHD3-205ENST00000449744 CYP3A5P20815 502 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 FSHRP23945 695 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 ELF1P32519 619 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 NASPP49321 788 aaPredicted RBP16.62■□□□□ 0.25
CHD3-205ENST00000449744 ARPP19P56211 112 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 SLFN12LQ6IEE8 588 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 RSPO2Q6UXX9 243 aaPredicted RBP16.62■□□□□ 0.25
CHD3-205ENST00000449744 RTL10Q7L3V2 364 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 CD302Q8IX05 232 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 APPL2Q8NEU8 664 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 HVCN1Q96D96 273 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 SUSD3Q96L08 255 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 MYADMQ96S97 322 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 TSPAN18Q96SJ8 248 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 PANK2Q9BZ23 570 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 MRPL44Q9H9J2 332 aaKnown RBP16.62■□□□□ 0.25
CHD3-205ENST00000449744 EPS15L1Q9UBC2 864 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 SEL1LQ9UBV2 794 aa16.62■□□□□ 0.25
CHD3-205ENST00000449744 IDEP14735 1019 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 GAP43P17677 238 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 LRPAP1P30533 357 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 ROR1Q01973 937 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 NHLH1Q02575 133 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 ENOX2Q16206 610 aaKnown RBP16.61■□□□□ 0.25
CHD3-205ENST00000449744 CTXN3Q4LDR2 81 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 ZBTB41Q5SVQ8 909 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 ADALQ6DHV7 355 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 SLC8B1Q6J4K2 584 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 ZNF280DQ6N043 979 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 SLC39A4Q6P5W5 647 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 ZNF720Q7Z2F6 126 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 LINC00301Q8NCQ3 95 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 ZNF461Q8TAF7 563 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 PRRX2Q99811 253 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 MFSD1Q9H3U5 465 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 CPSF3Q9UKF6 684 aaKnown RBP16.61■□□□□ 0.25
CHD3-205ENST00000449744 EXOC7Q9UPT5 735 aa16.61■□□□□ 0.25
CHD3-205ENST00000449744 ANKRD63C9JTQ0 380 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 SPTLC2O15270 562 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 PDGFBP01127 241 aaPredicted RBP16.6■□□□□ 0.25
CHD3-205ENST00000449744 LAMP2P13473 410 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 AVPR2P30518 371 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 MRE11P49959 708 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 ZBTB6Q15916 424 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms