RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 TAP1Q03518 808 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 NAB2Q15742 525 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 COBLL1Q53SF7 1204 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 NOMO2Q5JPE7 1267 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 GLB1LQ6UWU2 654 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 HS2ST1Q7LGA3 356 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 TMEM173Q86WV6 379 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-203ENST00000449575 ABI1Q8IZP0 508 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 PLEKHO2Q8TD55 490 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 NELFBQ8WX92 580 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 C18orf25Q96B23 403 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-203ENST00000449575 SNX27Q96L92 541 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 ST7Q9NRC1 585 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 DMAC2Q9NW81 257 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 GIT1Q9Y2X7 761 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 PCDHA11Q9Y5I1 949 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 VWA8A3KMH1 1905 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 COL4A4P53420 1690 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-203ENST00000449575 SMIM28A0A1B0GU29 152 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 A0A1W2PPC1 479 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 PLA2G4AP47712 749 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 GTF2A1P52655 376 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-203ENST00000449575 NLRP12P59046 1061 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 HABP4Q5JVS0 413 aaKnown RBP10.67□□□□□ -0.7
CCDC171-203ENST00000449575 LMBRD2Q68DH5 695 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-203ENST00000449575 C11orf57Q6ZUT1 292 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-203ENST00000449575 GPD1LQ8N335 351 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 TRIML1Q8N9V2 468 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 P2RX5Q93086 422 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 DUSP9Q99956 384 aaKnown RBP10.67□□□□□ -0.7
CCDC171-203ENST00000449575 SRRTQ9BXP5 876 aaKnown RBP10.67□□□□□ -0.7
CCDC171-203ENST00000449575 NRDE2Q9H7Z3 1164 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 PDE11AQ9HCR9 933 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 PTPRJQ12913 1337 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 EPOPA6NHQ4 379 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 CCP110O43303 1012 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 NFICP08651 508 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 CLTAP09496 248 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 NR2F2P24468 414 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 NOP2P46087 812 aaKnown RBP10.67□□□□□ -0.7
CCDC171-203ENST00000449575 SNRNP35Q16560 246 aaKnown RBP10.67□□□□□ -0.7
CCDC171-203ENST00000449575 TTI2Q6NXR4 508 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 EFCAB13Q8IY85 973 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 FBXL18Q96ME1 805 aa10.67□□□□□ -0.7
CCDC171-203ENST00000449575 POP1Q99575 1024 aaKnown RBP10.67□□□□□ -0.7
CCDC171-203ENST00000449575 PRRC2BQ5JSZ5 2229 aaKnown RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 INPPL1O15357 1258 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 EXTL3O43909 919 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 EXOC3O60645 756 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 ZC3H11AO75152 810 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 AKAP3O75969 853 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 CCNE1P24864 410 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 SMAD3P84022 425 aaKnown RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 XKR4Q5GH76 650 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 JADE1Q6IE81 842 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 C12orf56Q8IXR9 622 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 CMTR2Q8IYT2 770 aaKnown RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 FIBCD1Q8N539 461 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 XXYLT1Q8NBI6 393 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 GOLGA5Q8TBA6 731 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 FAM161BQ96MY7 647 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 PPP1R10Q96QC0 940 aaKnown RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 TTYH1Q9H313 450 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 RPF1Q9H9Y2 349 aaKnown RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 RBAKQ9NYW8 714 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 TUBGCP4Q9UGJ1 667 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 SPTBN5Q9NRC6 3674 aaKnown RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 CASTOR2A6NHX0 329 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 MYO1CO00159 1063 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 RFXAPO00287 272 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 PSMA7O14818 248 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 ZRANB2O95218 330 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 YARSP54577 528 aaKnown RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 DLG4P78352 724 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 RNASELQ05823 741 aaKnown RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 ADAM9Q13443 819 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 ZSCAN26Q16670 478 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 ICE2Q659A1 982 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 SYT10Q6XYQ8 523 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 BCL7CQ8WUZ0 217 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 TIFAQ96CG3 184 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 DHTKD1Q96HY7 919 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 RPS6KC1Q96S38 1066 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 TOPORSQ9NS56 1045 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-203ENST00000449575 PSD3Q9NYI0 1048 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 CNTN3Q9P232 1028 aa10.66□□□□□ -0.7
CCDC171-203ENST00000449575 HOXA2O43364 376 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 CALUO43852 315 aaPredicted RBP10.65□□□□□ -0.7
CCDC171-203ENST00000449575 ITGB1P05556 798 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 DSC1Q08554 894 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 PAK1Q13153 545 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 ERCC6LQ2NKX8 1250 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 PPP2R2DQ66LE6 453 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 Q7L0L9 218 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 APBB1IPQ7Z5R6 666 aaPredicted RBP10.65□□□□□ -0.7
CCDC171-203ENST00000449575 BRSK2Q8IWQ3 736 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 COLGALT2Q8IYK4 626 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 HACE1Q8IYU2 909 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 LRRC43Q8N309 656 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 UBXN4Q92575 508 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms